Malus sylvestris (European crab apple): 126626922
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Entry
126626922 CDS
T09027
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126626922
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Motif
Pfam:
Sel1
TPR_16
TPR_2
TPR_1
TPR_27
TPR_CcmH_CycH
TPR_14
Motif
Other DBs
NCBI-GeneID:
126626922
NCBI-ProteinID:
XP_050152278
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Position
6:complement(34013006..34016432)
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AA seq
684 aa
AA seq
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MTFAARRLLFSLLIFSLYPLSLSARPFILVLTKDDLLNTPASPDDSPPAADSAPNDSPDW
DEFGESAAAQSEEELDPGSWRPIFEPDPFKPDPATHPDDGYYSTVSKLIKSISSGDTALV
DEAVSEIEDSASRGVPHARSVVGFLYGTGQMRKQNKAKAFTYHYFAAEGGNMQSKMALAY
TYFRQDMFDKAVKLYSELADAAVNSFLISRDSPVIEAVRIHSGAEENKDALRKSRGEEDE
DFQILEYQAQKGNSAAMYKVGLFYYFGLRGLRRDHAKALSWFLKALEKGEPRAMELLGEI
YARGAGVERNYTKALEWLTLAAKQDHFSAYNGMGYLYVKGYGVEKKNYTKAKEYFEKAAD
NQDSGGHYNLGVMYLKGIGVKRDVKLACQYFIYAANAGQPKAFYQLGKMFHTGVGLKKNL
PRATALYKLVAERGPWSSLSRWALESYLKGDVGKAFFLYSRMAELGYEVAQSNAAWILDK
YGEQSVCIGESGLCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGQGTERDYERAA
EAYKHARSQANAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDSAAKLPVTLALASL
WIRKNYADGFLVHIIDSLPEVYPKVEEWIDTVLLEEGNATILTLFVCLLTVLYLRERQRR
HAVAAPDVIAAQHHPNEHVAPAPM
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgcagctcgaaggctcctcttctctctcctgattttctctctctaccccctc
tctctctccgcccgtcccttcatcctcgtcctgacaaaagacgacctcctaaacaccccc
gcctcgcccgatgactcgccgcccgccgccgactcagctccaaatgactcccccgactgg
gacgagttcggcgaatccgccgccgcgcagtccgaggaggagctcgacccgggctcctgg
cgcccaatcttcgaacccgaccccttcaagcccgacccggccacccaccccgacgacgga
tactactccaccgtctccaaattaatcaagtccatcagctccggagacactgccctcgtg
gacgaggccgtttcggagatcgaggactcggcttctcgcggcgtcccccacgcgcggtcc
gtggtggggtttctgtacggtacggggcagatgagaaagcagaacaaggccaaggctttc
acgtaccattacttcgccgccgagggcggcaacatgcagtcgaagatggccctcgcgtat
acttacttcaggcaagatatgtttgataaagcggtgaaattgtactcggaattggccgat
gcagctgtgaatagcttcctgatttcgagggactcgccggtgatcgaggcggtgaggatc
cacagcggagcggaggagaacaaggatgcgttgaggaagagccgcggcgaagaagacgag
gactttcagattttggagtaccaagctcagaagggaaactccgcggcaatgtataaggtc
ggcctgttttactatttcgggctgagagggttgcgccgcgaccatgccaaggcattgtcg
tggtttctgaaggctttggagaagggagagcctcgggctatggagctcctcggagagatt
tatgctagaggagccggtgttgagaggaattacaccaaggctctggagtggcttacactc
gcagccaaacaggatcatttttcggcctacaacggaatggggtatttgtatgttaaagga
tatggagtggagaagaagaactacactaaagcaaaggagtattttgaaaaggctgctgat
aatcaagacagtggcggtcactataacctaggagtaatgtatctcaaaggaattggggta
aagagagatgttaaacttgcatgtcaatactttatatatgctgctaatgctggtcaacct
aaggcattctaccagctagggaagatgtttcatactggagttgggcttaagaaaaatctt
ccacgggccactgcattatacaaattagttgcagaaaggggaccatggagttccttgtcc
cgatgggcacttgaatcgtacttgaaaggggacgtgggcaaggcatttttcttgtattca
aggatggccgagttaggctatgaggtagcacagagtaacgctgcatggattcttgacaaa
tatggggagcaaagcgtgtgcataggagaatccggtttgtgcactgatgcagaaaggcat
cagcgggcacattcattatggtggcaagcatccgagcagggtaatgaacacgctgctttg
ctgattggggatgcgtattactatggtcagggtactgagagggattatgaacgagcggca
gaggcttacaagcatgccaggtcccaggctaatgcccaagccatgtttaaccttggttac
atgcatgagcatggacaagggttgcctttggatcttcatcttgcaaagcgttactatgat
caagccctagagattgattccgcagcaaagttgcccgtcacgctagccctcgcaagctta
tggatacgaaaaaattatgccgacggtttcctggtacatataatcgattcattgcctgaa
gtctatcccaaagttgaagaatggattgataccgtgctacttgaagaaggaaacgcgaca
atattgactctttttgtttgtcttcttactgtcctatatctacgtgagcgacaacgcagg
catgctgttgctgcccccgatgtgattgccgcacagcaccacccgaatgagcatgttgca
cctgcacccatgtag
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