Malus sylvestris (European crab apple): 126626943
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Entry
126626943 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126626943
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126626943
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126626943
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126626943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf_RING_Vps8
zf-RING_16
BORCS6
zf-UDP
zf-RING_Vps41
RINGv
PHD
PHD_NSD
zf-C3HC4_3
Prok-RING_1
zf-RING_15
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
126626943
NCBI-ProteinID:
XP_050152306
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All DBs
Position
1:complement(15404054..15407788)
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AA seq
572 aa
AA seq
DB search
MANADSHNFTKTICSICYEDLKPTSEDLQSISICGHVFHELCLQQWFEYSARTKKYTCPV
CKQNCKQKDAGRLYFQSVGDAADATQRPISKCEEDPQVLRREVKRLEVAELGIRLAFDLQ
GKELKELKEELCQCKEVAQKEVVLKNEALKQQAYMQLQLTMKTEALDKSTMERLRLQERN
MALAKELAAFKLVSDLDLDEDEVSKLSTLGNGANTKDTIDILRKSLEMSKRNYKELINKY
NGLAREARESKKLEQEAKEKIKKMKTRVQEMEMVVEVKDNEILRALKASKTTRGEGIMQN
GERCNTNSVSVNNSSEVQRKHPYAPIGKLDRIEKLENDLLCHRKTENSNFTDHMDLSCTK
DGTSTTVHDKVRDAYSLGDKGASKLSTAKRGLSNPKLKEPTYEDVVNQKCTRLRSDAVSD
TRKETPTCNNTARTPAADVVILDDVEQDQPMFNIRKESPVPQPLPGTGDVCFSGGLLGPD
GTNRFLGKWCKRGLNKGSESRQNPSADSGNLIAVGADGRGGRIKVLRSLNHSTVDNKENA
PGTKRFKSGSKANSVQSQGCLQIEHFFGRVGR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcagattcccacaattttaccaaaacaatctgctcaatctgctacgaagac
ctcaagcccacttctgaggatctccaatccatctccatctgcggccatgtcttccacgag
ctctgtctacaacagtggttcgagtactctgcgaggacgaagaagtacacttgcccggtg
tgcaaacaaaattgcaagcaaaaggatgccggccggctttattttcagtcggtgggggac
gcggcggatgcgactcagaggccgattagcaaatgcgaggaagatccccaggtgttgcgt
cgagaggtgaaaaggttggaggtggcggagctgggaattcgtttggctttcgatcttcag
gggaaggagcttaaggagctcaaagaggagctttgtcaatgtaaggaggtggcacagaaa
gaagttgtcttgaaaaatgaagccttgaaacaacaagcatacatgcagctacagcttacg
atgaaaactgaggctcttgataaatcgactatggagcgtttgaggttgcaagaaagaaac
atggcattggccaaagagcttgcagcattcaaactggtatctgatctagatctggatgaa
gatgaggtttcaaagctttccactcttggtaatggtgccaacaccaaagacacgatagat
attcttagaaagtccttggagatgagtaaaaggaattacaaagaattgataaacaaatac
aatggtcttgcacgagaagctcgtgagagcaaaaaactggagcaggaggctaaagaaaag
attaaaaaaatgaagacaagggtacaagaaatggagatggttgtcgaagtaaaagataat
gaaattttgagggctttaaaagcttcaaagacaactcggggtgaaggaattatgcagaat
ggtgaaagatgtaacactaattcagtgtctgtcaacaattcatcagaagttcaaagaaaa
catccgtatgcacccattggtaagttggatagaattgaaaaattggaaaatgatttactg
tgtcataggaaaacagaaaactcaaacttcactgaccatatggatttaagctgtactaaa
gatggtacaagcaccactgttcatgataaagtaagagatgcctactctttaggagataaa
ggtgcttcaaaactttctacagctaagcgtggactttcaaatcccaaattgaaagaacca
acctatgaggatgttgttaaccagaagtgcactcggttgaggtcagatgcagtttctgat
actaggaaagaaactcctacttgtaacaatactgccaggactcctgctgccgatgttgtg
attctggatgatgttgaacaagatcaacccatgtttaacattagaaaggagtctcctgtc
ccacaaccacttcccggaacaggggatgtatgtttttctggtggcttgcttgggcctgat
ggaacaaacaggtttttaggtaaatggtgcaagcggggtctgaacaagggatcagaatca
aggcaaaacccaagtgcggattctggtaatttgattgctgtaggagctgacggaagaggt
ggaagaatcaaagttcttagatcactgaatcattcaacagtggataataaggagaatgca
ccggggacaaagcgcttcaagtcggggtctaaagcaaatagtgtgcagtcccaagggtgc
ttgcaaatagaacacttctttgggagggttggtagatga
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