Malus sylvestris (European crab apple): 126626944
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Entry
126626944 CDS
T09027
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126626944
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126626944
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126626944
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126626944
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
SR proteins
126626944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
126626944
NCBI-ProteinID:
XP_050152302
LinkDB
All DBs
Position
6:complement(20661380..20665154)
Genome browser
AA seq
211 aa
AA seq
DB search
MPYPRERRSASPHNAPSPVRGRRLRSLSRSRRSRSRSHESVNASNPGNNLYITGLSTRVT
STDLEKFFNKQGKVLDCHLVTDPRTRESRGFGFVTMETVEDAERCIKYLDRSVLEGRLVT
VEKAKRKRGRTPTPGRYQGLRDKRDAGRDRDRDCDRRRSRSYSPRRLQDRDPYPRDHRGR
SRSPYGRRADEHSDSYRRRRERSLSGGRNPR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccatacccaagagaaagaaggtccgcttcgccacacaacgctccttcacccgtcaga
ggccgccggttgagatcattgtcgaggtctaggagaagtcgttctaggagccatgaatct
gtcaatgcatccaatcctggaaacaacttgtacataacaggcttatccacaagggttacc
tctactgatcttgagaaattttttaataaacaggggaaggtactggactgccatctggtt
acagaccctcgcaccagagaatcccgtggatttggctttgtcacaatggaaactgttgag
gatgcagaacgctgcatcaaatatttggatcggtctgtgcttgaaggtcgattagttaca
gtggaaaaggcaaaaaggaaacgagggaggactccaactccaggaaggtatcaaggtttg
agagataaacgagatgcaggacgtgatcgtgatcgtgattgtgaccgtagacgatctcga
agctattcacctcgtaggttgcaagacagagatccttatcccagggaccaccgaggaaga
tcacgctctccatatggtaggagggcggatgaacactcggactcatacaggaggcgcagg
gaacgctccttgtcagggggcagaaaccctagatag
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