Malus sylvestris (European crab apple): 126627179
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Entry
126627179 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126627179
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126627179
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126627179
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126627179
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126627179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF3849
Phage_TAC_10
Motif
Other DBs
NCBI-GeneID:
126627179
NCBI-ProteinID:
XP_050152568
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All DBs
Position
6:4354307..4358526
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AA seq
732 aa
AA seq
DB search
MAEALDGSPPFSQSDAMDDLALVCMPEKADGFWPSSTLKPLGDQSLDTSLPNPNGSSPIF
EQVREEEAEPSPPPSPLNLVGNNLSIYELNSSDSSRVSSSWYSPWNSWSTAKGSPISFES
QFHKEETKPSMVSAGLANLGNTCFMNAILQCFTHTVPLLEGLRSSNHSMPCDRGSERFCV
LCALRDHIDLSIASSGRVVSPWKLVDNLNHISSYFQRYQQEDAHEFLQCFLDKLERSSMG
SMKKDESSSVQDKNLVEKVFGGRLVSKLRCCNCGHCSDTYEPLIDLSLEIEEADTLPRAL
ESFTKIENINDSETKFTCEKCKEKVSVEKQLVVDQAPQIAAFHLKRFKTDGSNVQKIEKH
VEFPLELDLKPYTGGSDIDMELKYELYAIVEHVGFSSTSGHYFCFIRSSPDTWHRLDDSR
VTRVREEFVLSQEAYILFYARKGTPWFLSVVEALKPCLDPAVMSTSPKSVLENVESTNNL
SPSVNYVDRCAANEPRDACETVTLSLHQVRPKEVDVSDTRGEASELSEWINGPKRDAGCS
QETTDTGAAIDASTPGGGRNNFDKTLGNTENICSTSTPVANSCHKRSAKVNLQPMTPPRS
PSLDLVFESREPSFHLPRDHVKSADNVTCKRSLNNAIRKDHLKSADNALCKRASNNVVED
AERTEAVRYLSKKSLNKGRASQLLAAMVGPQNGSSLDKKRKRAGSSPCKKVSRAGGSLKN
NHTMRPVAAALR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccctcgatgggtctccgccattttcgcagtctgacgccatggacgacctt
gctttggtttgtatgccagaaaaggcagatgggttttggccgtcttcaactctgaaaccc
ctaggcgaccaatctttggatacttctttaccaaaccctaacgggtcttcaccaattttt
gaacaagtacgagaagaagaagctgaaccttctccaccgccttcgcctctcaatcttgtt
ggtaataatttatcaatttatgaattgaattcttccgattcttcacgagtttcttcttct
tggtattctccgtggaattcatggtctactgccaagggatcgccgatttcctttgaatca
cagtttcataaggaagaaaccaagccctctatggtgagtgcagggcttgcaaatctaggt
aacacttgctttatgaatgcgattctgcaatgctttacgcacactgtgccgctcttggag
ggtcttcgttcttccaatcattcgatgccatgtgatcgtggtagtgaaagattctgcgtt
ctttgtgctcttcgtgaccacattgatctttcaatagcttcttcaggaagagttgtttcg
ccatggaaacttgtcgacaatttgaatcacatctcatcttacttccaaagataccagcaa
gaagatgcccatgagttcttgcaatgttttttagataaacttgagagatcttctatgggt
tctatgaaaaaggacgagagttcatctgtgcaagacaaaaaccttgtggaaaaggttttt
ggtggtcgtctcgtaagcaaactccgatgttgcaattgcggtcattgttctgacacatat
gaacctctgattgatctgagtctggagattgaagaagcagacactcttccaagggctttg
gagtccttcactaagatagaaaatatcaatgactcggagacaaagtttacatgtgagaag
tgcaaggaaaaagtgtcagtggagaagcagctcgtggttgaccaggcccctcaaattgct
gcatttcacctgaagagatttaagactgacggatctaatgttcagaagattgaaaaacat
gtagaatttcctctggagttggacttgaagccctacaccggtggcagtgacatcgatatg
gaattgaagtacgaactttatgcaattgtggagcatgttgggttctcatctacttctggg
cattacttttgcttcattcggtcctctccagatacatggcataggttggatgactcaagg
gtcactagggtacgagaagaatttgttctatcacaggaggcatacattctgttctatgca
aggaagggtactccatggtttttgagtgtagtggaagcactaaagccatgcttggatcca
gctgttatgagtacatcacctaagtcagttctagagaatgttgagagcaccaataattta
tccccgagtgtgaattatgttgatcgttgtgctgccaatgaacccagagatgcttgtgag
acggttactctttcgttgcatcaagtgagacctaaagaggttgatgtctctgacactaga
ggtgaagctagtgaactttctgaatggattaatgggcctaagcgtgatgctggttgttcc
caggagactacagatactggtgctgccattgatgcttcaactccaggtgggggaagaaac
aattttgataaaacgttgggcaacactgagaatatatgtagtacatcaactcctgttgca
aatagctgccacaaaaggtctgctaaagttaatctccaacctatgacgccacccagatct
ccaagcctggatttggtttttgagtctcgagaaccaagttttcatcttccacgcgatcat
gtgaagtcagcggacaatgtgacctgtaaaagatcattgaacaatgctattcgaaaggat
catttgaagtcagcagacaatgcgttgtgtaaaagagcgtcaaacaatgttgtagaagat
gcagagagaactgaagctgtcagatatctttcaaagaaaagtctgaataagggcagggca
agccaactactagcggccatggtaggacctcagaatggaagttcattggacaagaaaagg
aagagagcgggatcttcgccgtgcaaaaaggtcagccgtgctggtggcagccttaaaaac
aaccacactatgcgtcctgtggcagctgcattacgctga
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