Malus sylvestris (European crab apple): 126627183
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Entry
126627183 CDS
T09027
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126627183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126627183
03036 Chromosome and associated proteins [BR:
msyl03036
]
126627183
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126627183
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126627183
PBAF complex
126627183
GBAF(ncBAF) complex
126627183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
126627183
NCBI-ProteinID:
XP_050152577
LinkDB
All DBs
Position
6:complement(27612637..27615732)
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AA seq
542 aa
AA seq
DB search
MNNNNDQSKNVGVPPHFGNSGPVPQPMAMNHQPNLLTQSQPPTQGGAHFPGHFQLSEPQA
QALAQAQYVNAHAQGQTQAAHAQFVQLQAQAKSRAQLHNANTSNAGASSPSLATPSTGTA
KRANQRPPSRPPGSSSANTGSPFKTMELTPAARRKKRKLPDKQIPDKVAALLPESGLYTQ
LLEFEARVDAGLARKKMDIQESLKCPPRVQKTLRVYVFNTFANQTQTSPEKTNAEPPSWS
LKIIGRLLEDGRDPVVAGLTPKSRAKFSSLFKKVTIYLDQTLYPDNQVILWESSRSPSLH
DGFEVKRKGDKEFTAILRLEMNYVPEKFKLSPALHEVLGIEVETRPRIIAAIWHYVKARK
LQNPNDPTFFVCDPPLQKIFGEEKMKFSMVSQKISQHLTPPQPIHIEHKIKLSGNCPAGT
TCYDILVDVPMILEKEMSAFLGSTERSKEIDACDELICASIKKIHEHRRRRAFFLGFSQS
PAEFINTLIASQSKDLKLVAGDASRNVEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPG
ST
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatgatcagtccaagaatgtgggcgtgccacctcactttggcaattct
gggccggtgccgcaacctatggccatgaatcaccagcctaatcttctcactcaatcgcag
cctccgacacaggggggagctcattttccgggacacttccagttgtctgagccgcaagcg
caggcacttgcacaggcgcagtatgtgaatgctcacgcacaaggccaaactcaagctgcc
catgcccaatttgttcagttgcaagctcaagctaagtcacgtgcccagttgcataatgcg
aatactagtaatgctggtgcttcatcaccctctttggcaacgcctagcacaggaactgct
aagcgggcgaaccagaggccgccttctagacctccaggttcatctagtgccaacacgggt
tcaccatttaaaaccatggagctcaccccagctgctcgtagaaagaagcgaaagctacct
gataaacaaataccggacaaagtggctgcacttctgccagagtccggtctttatactcag
ttgcttgaatttgaagctcgtgttgatgctggtttggcaaggaagaagatggacatccag
gagtccctcaaatgtcctccccgtgttcaaaaaacacttagagtatatgtattcaacacc
tttgcgaatcagacacaaacaagtcctgagaagacaaatgcggaacccccttcatggtca
cttaagataattgggaggttactggaagacgggcgggatcctgtggttgctggattgaca
ccgaaatcaagggcaaaattttcatccctgttcaagaaagttaccatatacttggaccaa
accctctatccagataaccaagtgattttatgggaaagttcccgttcaccctctcttcat
gacggctttgaggtgaaaagaaaaggggataaggagtttactgcaatactaagactagaa
atgaattatgtacctgagaaattcaaactttcaccggccctccatgaagttctgggaatt
gaggtagagacccgacccagaattatagctgctatttggcactatgtcaaggccaggaag
ttgcagaacccaaatgaccctacgttctttgtgtgtgatccaccacttcagaagattttt
ggggaagagaagatgaagttttcaatggtttcacaaaagatatcacagcatttaacgcca
ccacagcctatacatatagagcataagataaaactttcaggaaattgtccagctggaact
acttgctatgatatactggttgatgtacccatgatattagagaaggagatgtctgcgttc
ttgggaagcaccgagaggagcaaagagattgatgcttgtgatgaattgatatgtgcatcc
ataaaaaaaatccatgaacatcgacggcggcgagctttctttcttgggttcagtcaatct
cctgcagagtttattaatactttgattgcttcccagagcaaggatctaaagcttgttgct
ggagacgctagtcgtaatgtggaaaaggagcgccgctcggatttctataatcaaccctgg
gttgaggatgctgttattcgttacctgaaccgaaagtcagccggaagtgatgctcccgga
agcacttga
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