Malus sylvestris (European crab apple): 126627672
Help
Entry
126627672 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126627672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126627672
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126627672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
FapA
ATG17_like
HK_sensor_dom_bact
COG3_N
Motif
Other DBs
NCBI-GeneID:
126627672
NCBI-ProteinID:
XP_050153140
LinkDB
All DBs
Position
7:12318034..12324438
Genome browser
AA seq
723 aa
AA seq
DB search
MSGFSSGSSASSSSAQSTSPFSFSNPPSSFSFGPSASPFGSSTPATTSTTGFSIGSSAFG
ASTPSNPSSSPSPFSFSLNSTSTPSSSLFGSSNPSSATTPSFGFAPTTTTTTSSASAPSF
GFIPSSTNTITSSASASFGFSTAASAAATTTTSSASAPSFVFSSAASSGLSLFGSSASTA
STPLFGSTPSQSLFGSSSSAPTSTASASPLFGAPSSATSSPFGATSFAPSAPTPLFGTSS
TSASQLFGTASSVPSAPSPLFGTASSSQPSSSVAPTTQSFQSFSTSSSAFTLPTSSPLLK
PTTSTPTTTAPPSTTASSFSSFGTPASSASQSSFGFSTSFSNAASKPTSQSFPTPSAPFL
STLTTTTPSSTPATSTTTQASFTMPSFAVNPATSQAPSTAATTAPMAAPASSAAPASSAA
SSGGSLVSSFSFQTASGATASSSAGFLSLTKGSTPAPSSQAQPSTTVPALGVGTSAPVTA
TTTTTSTAATQTSTSLVAASTSGTTSNVNTTVSTAPKLPSEITGKTVEEIIKEWNAELQE
RTGKFRKQANAIADWDKRILHNRDVLLRLEIEVAKVVETQANLERQLELIETHQQEVDKA
LQSMEEEAERIYKDERGLLRDDEAASTRDAMYEQAEFVERELEQVTEQIKSIIQTLNANQ
GGELDTNDGMAPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKLANEGPAADRELMAPKY
WMS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggattttcatccggatcctccgcctcctcctcttccgcccaatccacttcccct
ttctctttctccaaccctccttcctctttctcattcggcccttccgcctccccattcgga
tcctctacacctgccaccacgtccaccaccggcttctccattggatcctcggccttcggc
gcctccactccctctaacccttcctcctccccatctccattctccttctccctcaactcc
acttccactccctcctcctccctattcggatcctcaaaccctagctccgccactacccct
tccttcggtttcgcacccaccaccaccacaacaacgtcttcggcttccgccccttctttc
ggattcataccctcctctaccaacaccataacctcatctgcctccgcttcgtttggattc
tcaaccgccgcctccgctgccgccaccaccacaacctcctctgcttccgctccttctttt
gtattctcatcagccgcatcctctggcctgtccctgtttggctcctcggcctcaacggct
tcaactcctctgtttggttcaactccgtcccaatccctgtttggctcgtcctcatcggct
cccacctccaccgcctccgcctcccctctattcggagctccttcttccgccacttcatcc
ccattcggagcaacctcatttgcacccagcgcacccacacccctgtttggaacctcctcc
acttccgcttcgcagctgtttggcacagcgtcctctgtacccagcgcaccctcgccgctg
tttggcacagcttcctcgtcccaaccttcatcatctgtagctccaacgacccaatcgttc
caaagcttctccacttcctcttcagccttcacattaccaacatcctcccctcttttgaaa
cccacaacctccactcccaccaccactgctcctccatcaacaaccgcttccagcttctcc
tccttcggaacgccggcttcctccgcttcacaatcctctttcggtttctccaccagtttc
tccaatgccgcctcaaaaccaacctcacaatccttcccaactccctccgctccgtttctt
tctactctcacgaccacaaccccttcttcgactccagcaactagcactacaacccaagcc
tctttcactatgccgtcttttgctgtgaatcctgctacttctcaggctcctagcaccgct
gcaacaacggctccaatggcggcccctgcgagctcggcggcccctgcgagctcagcagct
tcttccgggggctcgcttgtaagctcgttctccttccaaactgcttcaggagctactgct
tcttcttctgctggctttttgtctttgacaaaagggtctacacctgctccatcgtctcaa
gcacaaccaagcactaccgtgcctgcattgggtgtcggtacttcagcccctgtaactgct
acgacaaccactacaagtactgctgcaactcagacatcaacatcacttgttgcagcttct
actagtgggacaacttcaaatgtcaacactacagtatctactgcaccaaaattaccgtct
gaaatcacagggaagactgtggaggagatcatcaaggagtggaatgctgagcttcaagag
cgtactggaaaattccgaaagcaggctaatgcaatagcagattgggacaaaaggattttg
cacaaccgtgatgttcttcttaggctcgagattgaagtggcgaaagtggttgaaacccaa
gctaacttggagcggcaactagagttaattgagactcatcagcaagaggttgataaggct
ttgcaaagcatggaagaagaagctgagcgtatatacaaggatgaacgtggattgctccgt
gatgatgaggctgcatccacaagagatgcaatgtatgagcaagctgagtttgtagagagg
gaactagagcaggtgacagaacagatcaaatcaattattcagaccttaaatgccaaccag
ggaggggaacttgatacaaatgatggtatggctccgttagatgtggttgtccgaatctta
aacaatcagcttagctctttaatgtggattgatgaaaaggccgaagaattctcctcgcga
attcagaagctcgccaatgaaggtcctgctgcagatcgcgaattaatggctccaaaatac
tggatgtcgtga
DBGET
integrated database retrieval system
