Malus sylvestris (European crab apple): 126627810
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Entry
126627810 CDS
T09027
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126627810
03012 Translation factors [BR:
msyl03012
]
126627810
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126627810
mRNA cycle factors
Stress granule specific factors
126627810
Translation factors [BR:
msyl03012
]
Eukaryotic type
Initiation factors
eIF-4
126627810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
126627810
NCBI-ProteinID:
XP_050153319
LinkDB
All DBs
Position
7:9892259..9940645
Genome browser
AA seq
1857 aa
AA seq
DB search
MSFNQSRSDKNETQYRKTGRTASSNQQHRGYTPSYPKGTGAGGPGPSISSNRSYKKNNNN
AQGGQSRASVTTVNTQDSGIAFAQRGVVQNGAHAQPQLHGGSDAPVASTASRTAEASASQ
RSSRTVPKPPTSQSASMTSDTRTPTTPAKPPGDASKGFAFQFGSISPGFMNGMQIPARTS
SAPPNLDEQKRDQARHDSFRVVPSVPVPTVPKQQLPRKDSASIDQPNAAEVHMVPKVKKD
VQVSHAPPPSQTQKPSPHPMAGMSMPMPFHQPQVPVQFGGPNQQIQSQSMSASSIQMPMP
MQLSIGSTQVQQPVFVQGLQPHPMQPQGIMHQGQNMTFTPQMGPQIPQMGNLGISMASQY
PQQQGRKFGGPRKTPVKITHPDTHEELRLDKRTDSYPDSGPSAPRTHPNIPPQSQPIPSF
AHPHTTTFYANSYNPSSLYYPAPSSHPLTSSHMPPNSQAPRFSYPVSQGSQPVPFINPSS
HSTLPVSKSGSLMHNVVDPPNLEHARDVHNISASVPSATIPVVIKPPAGTVGEKVVDPLP
NSSTVVEKGELSKPVRQSGEIIQSAGDQSILKSVPVMEKISANAPATASVEKQVSNLLSS
SAAAPTEESAPVVIITEPRKKETLSRSNSIIDQQKNPGRKGNVQPQLQVVGQSSSTSSVL
SQSAEHGIPSTSDVSGTVEANTTLAPVTSASVSKSAKEPLSDFSAPTADCLESKTEVIGQ
GTIPISSEISAPGMVVGTSDSVHRTQLDSSLQPDEQGQRDLMGAEQSLSGNYKQDTEAHG
ISAESISIKPLESAKVPAEHSVVKETAKGSTVAISDTAQGGQGHYECLHAESGGMDASLS
RSDSMGGSEVFFSKSSKLEQHSSSVQTTELSGRISKTETEGTCEENIGGGEGNIENIGSG
GDSRSESDFRDKPELNRTKSTISKGKKKRKEILSKADAAGVTSDLYGAYKNPEEKKGIEN
TESIMTSIISKQVATDAPQQDAVGREKDAPVKAEPEDWEDAADISTLKLETSDTGELVCG
VDDSDKDGHEHGAKKYSRDFLMKFSEQFTELPEGFEILSDIAEILDANVNAATSIDYDSL
PSPGRIVDRQGGAPRLDRRGSGIMDDDRWNKGGAANFRTGQGPNFGVLRNPRAPTSVQQH
VRGILPGPAHSVGHQGGMQRNNSDADRWQRATNFQPKGLMPSPHTPLQVMHKADRKYEVG
KVSDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNATTLTGVISQIFDKALMEPTF
CEMYANFCFYLAGELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEEGQVKQ
SEEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQQQTPDEEDIEALC
KLMSTIGEMIDHPKAKEHMDAYFERMKSLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKV
EGPKKIEEVHRDAAQERQAQSSRLARGPGINPSARRGPPMEFSPRGSTMLSSPNAHMGGF
RGMPAQVRGYGSQDVRTDERHSYESRTLSVPLTHRPIGDDSITLGPQGGLARGMSIRGPP
SMSAAPLAEMPPSAGDSRRMTAGSNGFSSLSERTTYNPREDPVPRYMPDRFSGPAAYDQS
SVSERNLSFGGRDLRSSDHRTLPTSPPTRAHGATLTQNVPSENVLTEDRLRDLSLAAIKE
FYSARDEKEVALCIKELNSPSFHPSIISLWVTDSFERKDTERHLLAKLLVNLTKNHDGTL
SQPQLIKGFEAVLSSLEDAVNDAPRAPEFLGLIFAKVILENVISLNQIGQLIQEGGEEPG
HLLKGGLAGNVLGSALEIIKSEKGDSGLNEIRMSSNLRLETFRPPDPLKSRILEKFI
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatcaaggtcggataagaacgagacgcagtaccggaaaacagggcga
accgcaagctctaatcagcagcacaggggatacacaccatcttaccctaagggcaccggc
gccggtgggcccggcccttccatctcctccaaccgcagttataagaagaataataacaat
gcacaaggaggacaatccagggcaagtgtaaccactgtaaatactcaggattccggtatt
gcttttgcacaacgtggcgttgtacaaaacggagcccatgcacagccccaattgcatgga
ggttctgatgcacctgttgcaagcacagcttcccgtacagctgaagcatcagcctctcag
agaagctcccgaactgttccaaaacctcccacttctcaatctgcctccatgacttctgac
acaagaacacccactacaccagcgaagcccccaggagatgcgtccaagggctttgccttt
cagtttgggtctataagccctggcttcatgaatgggatgcagattcctgctcgaaccagc
tcagctcccccaaatttggatgagcagaaacgtgatcaggcgcgccatgattcttttaga
gttgtgccttcagtgccagtccctactgttcctaaacagcagttaccaaggaaagattca
gcgtccattgatcaacctaatgctgctgaggttcatatggtacccaaggttaaaaaggat
gtgcaagtctcacatgcaccccctcctagtcaaactcagaaaccttctcctcatccaatg
gctgggatgtccatgccaatgccatttcatcagccacaggttccagtgcaatttggtggc
cccaaccagcagatccaatctcagagtatgagtgccagttcaattcaaatgccaatgcct
atgcaattatcaattggtagtactcaagtacagcagccagtgtttgttcaaggtctccag
ccccatccaatgcagccccagggaattatgcatcagggccagaacatgacttttaccccc
caaatgggtcctcaaatacctcagatgggcaacttggggatcagcatggcatcacaatac
ccccaacaacagggtaggaagtttggcggccctcgtaaaactcctgtcaagattacacat
ccagatacacatgaagagttgaggcttgataaaaggacagattcatatccagatagtggg
ccatcagcccccaggactcacccaaacattcctcctcaatcccagcctattccatcattt
gcccatcctcatactaccaccttttatgccaattcttacaatcccagctccctatattat
cctgctccaagttctcatcccttaactagtagtcatatgccgcccaattcacaagcaccg
aggttcagctatccagtcagccagggttcccaacctgtacctttcattaatccgtcatct
catagtaccctgcctgttagcaagtctgggtcccttatgcacaatgtggtggatccacct
aacctggaacatgcacgtgatgtacataatataagtgcctctgttccatcagcaactatt
cctgttgtaattaaaccacctgctggaactgttggagagaaggttgtcgacccattgcca
aacagctcaactgttgttgaaaaaggtgaattatcaaagcctgtgagacaatctggagaa
attatccaatctgcaggtgaccaatccatcctcaaatcagtgccggtgatggaaaaaata
tctgcaaatgcacctgccactgcttcagttgaaaaacaggtttcaaatcttttgtcctct
tctgcagctgccccaactgaggagtctgcaccagttgtgatcatcactgaacccagaaaa
aaagaaactcttagtcggtcaaactcaattatagatcagcaaaagaatccagggaggaag
ggaaatgttcaaccacagcttcaggttgttgggcagtctagctctacatcaagcgttctg
tctcagtctgcagagcatggtataccttctactagtgatgtttctggcactgtagaagct
aatacaactcttgctccagtaactagtgcatctgtttcaaagtcagcgaaggaaccactg
tcagattttagtgctcctactgctgattgtttggaatcaaagactgaagttattgggcaa
ggcactattcccatctcttctgaaatatctgctcctgggatggttgttggtacttcagat
tccgttcatcgtactcaactagacagttctttacaaccagatgaacaaggacagcgtgac
ttgatgggggcagaacaaagtttgtctggaaattacaaacaggatactgaagctcatggt
atttctgcagaatccatctccataaaacctctggaatctgctaaagtacctgcagagcat
tctgttgtgaaggaaacagctaagggaagtactgttgcaatctcagacactgcacaagga
gggcagggccattatgagtgtctccatgcagaatctggtggaatggatgcctctttaagc
agaagtgatagtatgggtggtagtgaagtttttttttcaaaatctagcaaattagagcag
cattcttcttctgttcaaactaccgaactttcgggtagaatttcaaaaactgaaactgaa
ggtacatgtgaggagaatattggtggtggtgagggaaatattgagaatattggtagtggt
ggggattctcgttcagagtcagacttcagggacaaacctgaactgaatagaactaagagt
actatttcaaaggggaagaagaaaagaaaagaaattctttctaaggcagatgctgctggc
gtgacctctgatctttatggggcatacaagaaccctgaagaaaagaagggtattgaaaac
actgaaagtattatgaccagtataatttcaaagcaggtagctactgatgctcctcagcaa
gatgctgtagggagagagaaagatgcaccggttaaagctgagccagaggattgggaagat
gctgctgacatctctaccctaaaactggaaacctcagatactggagagctggtctgtgga
gtggatgattctgacaaagatggacatgaacatggggcgaagaaatattccagagatttc
cttatgaaattttctgagcaatttactgagcttccagaaggttttgaaattttgtctgat
atagcagagatcttggatgctaatgtgaatgctgctacttctattgattatgattcgctc
cctagtccgggaagaattgttgataggcaaggaggggcccctagacttgaccgtcgtggg
agtggaataatggatgatgatagatggaataagggaggtgctgcgaatttccgaactggc
caaggaccaaattttggtgttttgaggaatccacgtgcaccgacatcagttcagcagcat
gttagagggatcctgcctgggcctgctcactctgttggtcatcagggagggatgcaaaga
aataattctgatgctgacaggtggcagagagctacaaattttcaacctaagggcttgatg
ccttctcctcatactccattacaggtgatgcacaaagctgacaggaagtatgaagtgggt
aaagtgagtgatgaagagcaggccaagcaaaggcagttaaaggctatactgaacaagtta
actcctcaaaactttgaaaaactattcgagcaagtgaaagctgttaatatagataatgca
acgactctaactggtgtcatttcacagatctttgacaaggctcttatggagcctactttc
tgtgagatgtatgctaacttctgtttttatcttgctggagagttgcctgatttcagcgag
gacaatgaaaagataacttttaagagattgcttttgaacaagtgccaggaggaatttgag
aggggagaaagagagcaagaggaggccaataaggccgatgaggagggtcaggtgaaacag
tctgaagaagaaagagaggagaaaagaatcaaagcgcgaagacgaatgttgggtaacatt
agattaattggggagctttacaaaaagaaaatgttgactgagagaattatgcacgaatgc
attaaaaagttgttaggtcagcaacagactccagatgaggaagatattgaagctttgtgc
aaactaatgagcacaattggggagatgattgatcatccgaaagccaaggagcacatggat
gcatattttgaaaggatgaaaagcttatcgaataacatgaaattatcttctagggttagg
ttcatgttgaaggatgcaattgatttgagaaagaataaatggcagcagaggaggaaagtt
gaaggaccaaaaaagattgaggaagtacacagagatgctgcacaagaacgacaggcacag
tctagtaggctggcccgtggtcctggaatcaatccatcagctagaagggggcctcctatg
gaattcagtccaagaggatcgactatgttatcttcacctaatgcccatatgggtggtttc
cgtgggatgcctgctcaggttcgtggttatggcagtcaggatgtccgtacagatgaaaga
cattcttatgagagtaggaccttgtcagttcccttgacacacagaccaattggtgatgat
tctataactttgggtccccagggtggtcttgccagaggaatgtccatcagaggaccacca
tcaatgtcagctgctcctttggctgagatgcctcccagtgctggagactctaggaggatg
actgctggttcgaatggtttcagttctctttcagagcggacaacttacaacccaagggag
gatcctgtgccaagatatatgccagatagattttcaggtccagctgcttatgatcagtca
agcgtatcagagcgtaatttaagttttggtggtagggacctgaggagttcagaccataga
actcttccaacttcaccacccacacgtgcacatggagcaactttaacacaaaatgttcct
tcagaaaatgtattgacagaagaccgtcttagagatctgtctttggcagcaattaaagaa
ttttacagtgctcgagacgagaaagaggttgctttatgcattaaagagctgaactcacca
agcttccatccgtcgattatctctctttgggtcacagactcttttgagaggaaggacact
gaaagacatctcctggcaaagcttctggtcaaccttacaaagaaccatgatggaactttg
agtcagcctcagctcatcaaagggtttgaagctgttctgtcctccttagaggatgcagtg
aatgatgccccgagagcaccagagtttcttggccttatctttgccaaagtcattttagaa
aatgtcatttccttgaatcagattggccaattaatacaagaaggtggagaggagccaggg
catcttctgaaaggcgggcttgcaggcaacgttcttgggagtgccttggagattatcaaa
tcagagaaaggagatagcggtttgaatgagatccgtatgtcctccaacttgcggttagag
acttttcgtcccccagatcctctcaaatcaaggatactagagaaatttatttag
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integrated database retrieval system
