Malus sylvestris (European crab apple): 126627831
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Entry
126627831 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126627831
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126627831
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
126627831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
PRC2_EED_ins
Keratin_matx
DUF4083
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
126627831
NCBI-ProteinID:
XP_050153353
LinkDB
All DBs
Position
7:9442490..9444073
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AA seq
323 aa
AA seq
DB search
MSETTAASPAPSPPLLPHRKSSSFFKNLSPNLLIIIVILAATLVASICLILRHLNSRCIR
RLAPSPSDSFSDSRRISTRRINPDTSPSLPLYTFSSIARRSSSTISADCAVCLSKFEPSD
EVHLLPLCCHTFHSACIDPWLQSQQTCPLCRSSIAASDAELMMLVSSNAEPATANGSGRF
RLEIGNVSLRNNNQTTTTNSPNRHSYSVGSFDYSADEETSEVRLSNAEREKDEVVLVVAE
PEPSIPPSILAAEVGSGRSSWLKDYIDQLSSTLSSRDMSFRSSGRFYTGSSCRSEVSIAG
DSSLETERVGEEISEMFRWLAGV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacaacagcagcatcaccagcgccgtcaccgccattactacctcaccgaaaa
tcctcctccttcttcaaaaacctaagcccgaacctcctcatcatcatcgtcatcctcgca
gccacgctcgtggcctcaatctgcctcatcctccgccacctcaacagccggtgcatccgt
cgccttgctccctcaccctccgactcattctccgactcccgccgcatatccactcgccga
atcaatcccgatacctctccttccctccctctctacaccttctcctccatcgcccgccga
tcttcctctaccatctccgccgactgcgccgtgtgtctgtcgaaattcgagcccagcgac
gaggtccacctcctcccgctctgctgccacaccttccactccgcctgcatcgacccgtgg
ctacagtcgcagcagacttgcccgctatgtcgctcctcgatcgccgcttccgacgccgag
ctcatgatgctcgtctcctccaatgccgaaccagccacagcgaacggtagcggacgcttc
cgtctcgaaatcggaaacgtgagcctccgcaacaacaatcagacgacaacgacgaattcc
cccaatcgacactcctactccgtcggctccttcgattacagtgcagatgaggagacgtca
gaagtgcggctgagcaatgctgagcgagagaaagatgaggtcgtcttggtagtggcagag
ccggaaccgtcaattccgccgtcgatcctcgccgcggaggtcggctcgggaaggtcgagc
tggctcaaagactacattgatcaactgtccagcaccctctcgtcccgagatatgtcattt
cggagctctggaagattctacactggaagtagctgccggagcgaggtgtctatcgccggc
gattcgagcttggaaacagagcgcgtcggagaagagatatccgagatgtttcggtggctt
gcaggggtatga
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integrated database retrieval system
