Malus sylvestris (European crab apple): 126628069
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Entry
126628069 CDS
T09027
Name
(RefSeq) protein argonaute 4A-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126628069
03036 Chromosome and associated proteins [BR:
msyl03036
]
126628069
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126628069
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126628069
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126628069
microRNA pathway
RISC loading complex
126628069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
126628069
NCBI-ProteinID:
XP_050153609
LinkDB
All DBs
Position
7:4987035..4995682
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AA seq
911 aa
AA seq
DB search
MERLNPDRLELPPPPPIIPPNVVPTVAEEKSLELYKKASTPKRVPMARSGNGTKGQKIPL
LTNHFKVAVNKSDEYFFHYSIAMSYEDGTPVDGKGIGRKVIDKVKQTYAMELADKEFAYD
GEKSLFTVGPLPHNRLEFTVVLDDISSTRRTASPGGGSNRADSEGDRKRVKKQFQSKQLN
VLINYATKIPMQAIVNAIRGQDSEHFQEAVRVLDIVLRQNAAKQGCLLVRQSFFHNNPRN
FADLGSGVLGCRGFHSSFRATQGGLSLNMDVSTTMIVKPGPVLDFLMLNQNVKTPYQIDW
TKAKRMLKNLRITTYSSKMEYKITGLSDRPCKEQRFFLKSKKGQDGDGEEITVSKYFAVY
KNLPLRDSADFPCINVGKPKKPSYFPLELCSLVSLQRYTKSLTNLQRASLVEKSRQKPQE
RMSVLRDALRTSNYDADLMLRSSGVSIGVDFVQVEGRVLPAPKLKVGNGEDFFPRNGRWN
FNNKKLVQPVTIDRWAIVNFSARCDTRNLVSNMMKCGNMKGIAIKEPFMVFDESNQHRRE
PAPIRVDKMFEYIKSKLPGPPQLLLCILPERKNSDIYGPWKRKNLSELGIVTQCIAPTKV
NDQYITNVLLKINAKMGGMNSLLSVEHSPSIPLVSKRPTLILGMDVSHGSPGRSDVPSIA
AVVSSRHWPLISRYRAAVRTQSPKVEMIASLFKPVSDKEDDGIIRELLVDFYATSGSRKP
DQIIIFRDGVSESQFNQVLNVELDQIIEACKFLDETWSPKFMLIVAQKNHHTKFFQTHSP
DNVPPGTIIDNKVCHPKNNDFYLCSHAGMIGTTRPTHYHVLYDELGFSTDDLQELVHSLS
YVYQRSTTAISVVAPICYAHLAAAQISQFIKFDEMSETASSHGGGITVPGAVPVPELPKL
HKNVINSMFFC
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcttgaatcccgatagactcgaacttcctccaccaccacccattattcctcca
aatgttgtcccaactgtggcagaggaaaagtctcttgaactatataagaaagcatcaact
ccaaaacgtgttcccatggcaaggagtgggaatggaactaaagggcaaaagatccctctt
ctgaccaaccatttcaaagtggcagtgaacaagtctgatgagtactttttccattacagt
attgcgatgtcttatgaagatggtacccccgtcgatgggaaaggcattggacgaaaggtc
attgataaagtgaaacagacatacgcaatggagcttgccgataaagaatttgcttatgac
ggagagaaaagcttgtttaccgttggccctcttcctcacaacagacttgagttcacagtt
gtactggatgacatctcatcgaccaggaggactgcaagcccaggaggtggctccaaccgt
gctgacagtgagggagatcggaagagagttaagaagcaatttcaatccaaacaattaaat
gtgctgatcaactatgctactaaaattccaatgcaagcaatcgtgaatgcaatacgtggt
caggattcagaacattttcaggaagcggtgagggttcttgatatcgtactgaggcagaat
gcagcgaaacagggttgtcttcttgtccgacagtctttcttccacaacaatccaaggaac
ttcgcggacttgggatcaggtgtgttaggctgcaggggttttcattcaagtttccgagcc
acccaagggggtctatctcttaatatggacgtatccactacaatgattgtaaaacctggc
cccgttctagactttctgatgctaaaccagaacgttaaaactccttaccagatcgattgg
acgaaggctaagagaatgctgaaaaatctaaggatcacaacctattcatctaagatggag
tacaaaatcactggactgagtgatagaccatgcaaagagcagaggttcttcctgaaatcg
aaaaaaggacaggatggtgatggagaagaaattacggtttctaaatattttgctgtgtat
aaaaacctaccattgcgggattcagcagacttcccgtgcatcaatgttgggaaaccaaag
aagccatcttactttccacttgagctttgtagcttggtttcactgcaacgctatacaaaa
tctttaaccaatttgcaaagggcttcactagtggagaagtctcggcagaagccccaggag
aggatgtcagttttgcgtgatgcactgaggactagtaattatgatgctgacctgatgctt
cgttcttctggagtgtccattggtgttgactttgtgcaggttgaaggccgtgtattgcca
gctccaaagctaaaagttgggaacggagaggacttttttccacgcaacgggaggtggaat
tttaacaacaagaaactggtacaacctgtgactatagatcgttgggctattgtcaatttc
tctgctcgctgtgacactcggaacctggtcagcaatatgatgaagtgcggaaatatgaaa
ggaattgccataaaggaaccgtttatggtatttgatgaaagtaaccagcacagacgtgaa
ccagctcccattagagtggataagatgtttgaatacataaagtcaaaacttcctggacca
cctcaacttctgttgtgtattcttcctgagaggaagaattctgacatatatggtccatgg
aaaaggaagaatctttctgagcttgggattgtaacacagtgcattgctcctacaaaagtg
aatgatcagtacatcacaaatgtgctcctgaaaatcaatgcaaagatgggtggaatgaat
tcgttgctaagtgtggagcattctccttctattccattggtttccaagcgccccactctg
attctcggtatggatgtgtcacacggctcacctgggcggtcagacgtgccttctattgca
gcggtggtgagttccaggcactggcccttgatttctcgttaccgagctgctgtgcgtact
caatcaccaaaagtggaaatgatagcttctctgttcaagcctgtgtcagataaagaggat
gatggcataatcagggaactgttggtagacttttatgctacttcaggaagcaggaagccg
gatcagataattattttcagggatggagtgagtgaatcacagttcaaccaagtcttgaat
gtggaactggatcagattattgaggcctgcaaatttcttgatgagacttggtctccaaag
ttcatgttgattgttgcacaaaagaatcatcacaccaagttcttccagacgcattcacct
gacaatgttccaccgggaaccatcatagacaacaaagtctgtcaccccaagaacaatgat
ttctacttgtgctctcatgctgggatgattgggactactcggcctacccattatcatgtt
ctgtatgatgaacttgggttttcaacggatgacttgcaagaattggttcattctctgtct
tatgtgtaccaaagaagcacgacagccatatccgtagttgctccaatctgctacgcccat
ctagctgctgcccagatttcccagttcatcaagtttgatgaaatgtcggagactgcctca
agccatggtggtggaatcacagttccaggtgctgtgccggtgcccgagttacccaagctg
cataaaaatgtgatcaactccatgttcttctgttaa
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