Malus sylvestris (European crab apple): 126628227
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Entry
126628227 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126628227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126628227
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126628227
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
126628227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
126628227
NCBI-ProteinID:
XP_050153796
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All DBs
Position
7:complement(21881099..21885215)
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AA seq
322 aa
AA seq
DB search
MESDIIESFASLDLIDDDEIHSRPIHQFVSVPKAHSNTGSNIPGTTSVHELLECPVCTNS
MYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCP
EIFPYYSKLKHEAVCNFRPYNCPYAGSDCSTVGDIPFLVSHLRDDHKVDMHSGCTFNHRY
VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEAEARNYSYSL
EVGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRILK
EQQNPEGAKVCEVPCTIAVQTD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagacatcattgaaagttttgcgtctttggatttgattgacgatgacgagatc
catagccgtccgattcaccagtttgtttcagttccgaaggcgcacagcaacaccggcagt
aacattcccggcaccaccagcgtccacgagcttcttgaatgccctgtttgtaccaattca
atgtaccctccaatccatcagtgtcacaatgggcataccctttgttccacctgtaaagca
agggtgcataaccggtgcccaacttgtagacaggagcttggtgacataaggtgtctagca
ctggagaaggttgctgaatcgcttgaactgccctgcaagtattgctctctagggtgccca
gagatatttccctattatagtaaactcaaacacgaggctgtctgtaacttcagaccatac
aactgtccatatgctggatcagactgctccactgttggggatattccattccttgtttct
cacctccgggatgatcacaaggtggacatgcattccggatgcacttttaatcatcgttat
gtaaagtctaatcctcgtgaagtagaaaatgccacatggatgttaactgtcttccactgt
tttggtcagtatttctgtctacattttgaagccttccagcttggtatggctcctgtttac
atggcatttctccggttcatgggggatgaagcagaagctcggaactacagctacagcctg
gaggttggaggaaatggccgaaagctgatttgggagggcaacccaagaagcataagggat
agccacaagaaggttagagacagccatgatggcctcataatacagcgcaacatggcgctt
ttcttctctggtggggataggaaagagctgaagctgcgggtcacaggacgaatattgaag
gaacagcagaacccagaaggggcgaaagtttgtgaagtaccgtgtacgattgcagttcaa
actgactga
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integrated database retrieval system
