Malus sylvestris (European crab apple): 126628324
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Entry
126628324 CDS
T09027
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126628324
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126628324
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126628324
NCBI-ProteinID:
XP_050153913
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Position
7:1194396..1198613
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AA seq
435 aa
AA seq
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MQLCLRQKVKVTMFSQSQFLSVLLIILASFPFSFSSDLGNPLVVLDLHRHHRTRRLQSTS
ANNVTVNVDRFGAKGDGGDDTQAFMKAWEKACSSERGVELVVPKDRVYHLKPMNFSGPCK
SHVTLKIYGTIKASTKRSDYTDRRHWILFTNLNNFTVEGGGTINGNGRKWWQNSCKVNES
LPCTLAPNAVTFFGCNTLEVDNVRFRNAQQMHLSFESCVNVKASNLIVTAPGDSPNTDGI
HVTATQNIRISNCLIRTGDDCISIVSGSKNVRAEDITCGPGHGISIGSLGAGNSQAEVSD
VVVSRAKITGTTNGLRIKTWQGGSGNATNIRFKNVMMANVSNPIIIDQHYCDQDSPCQEQ
ASAVKISNVVYENVKGTSASKVAVKFDCSKSFGCQQILLKDVNLRSLANGIAQASCEHVD
LSHKGTVSPKCSSLI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtgtctgcgtcaaaaagtgaaagttacaatgttttcacaaagccagtttctc
tcagtacttctcataatattagcttcgtttcccttctcttttagtagcgacctagggaac
ccactagttgtacttgatcttcatcgtcaccatcgaacaagaaggcttcaatcaacttca
gcaaataatgttacagtaaatgtggatcgttttggagcaaaaggagatggaggggatgat
acccaggcatttatgaaggcttgggagaaggcttgttcttctgaaagaggtgttgagctt
gtggttcctaaggatagggtctatcatctgaagccaatgaatttctccggcccttgcaaa
tctcatgtcacgctcaagatctatggaaccatcaaagcctctaccaaacgatcagattac
acggatagacggcattggattttgtttacaaatttgaataactttacagttgaaggtggt
ggcaccatcaatggcaatggaaggaaatggtggcaaaactcatgcaaagttaatgaatcc
cttccttgcacgctcgcaccaaatgccgtgactttcttcggttgcaacactttggaagta
gacaatgtgaggttccgaaatgcccagcaaatgcatctatcttttgagtcgtgtgtgaat
gtaaaagcttcgaatctcatagtgaccgcaccaggcgatagcccaaacacagatggaatc
catgtcacagcaacacaaaatattcggataagcaactgtctcattagaacaggtgatgac
tgtatttcgatagtaagtgggtcaaaaaatgttcgagctgaggatataacctgcggacca
ggtcatggaattagcattggaagcttaggagctggaaattcacaagcagaggtttcagat
gtggtggtttctagagccaagattactggcaccactaacggattaagaataaagacttgg
cagggcgggtctgggaatgcaacaaacatcagattcaaaaatgttatgatggccaatgtg
agcaatccaattatcatagaccaacactattgcgatcaggattcaccgtgccaagaacag
gcttcagctgtaaaaataagcaatgtggtatacgagaatgtgaaaggcacaagtgcatca
aaagtggcagtgaaatttgactgcagcaagagtttcggatgtcaacaaattttgttaaaa
gacgtaaacctaagatctctagccaatggaattgcccaagcttcgtgtgagcatgtcgat
ttaagccataaaggaacggtttctccaaaatgctcttcgttaatttaa
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