Malus sylvestris (European crab apple): 126628485
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Entry
126628485 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126628485
KO
K12874
intron-binding protein aquarius
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126628485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126628485
Spliceosome [BR:
msyl03041
]
Complex B
Other components
Prp19-related factors
126628485
Complex C
126628485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD-helicase
UPF0540_At1g62060_beta
AAA_22
SLFN-g3_helicase
UvrD_C_2
AIRS
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
126628485
NCBI-ProteinID:
XP_050154136
LinkDB
All DBs
Position
7:2941465..2951072
Genome browser
AA seq
1523 aa
AA seq
DB search
MTKVYGTGPYDFKRHHVAEYPLEYPVEAKPGSALPSSITLSEIQRDRLTMIAADNWSKTL
DASKPKKPFEPELVKVIYRTELSVEEGQRRAVPSQRVMILEVSQYLENYLWPNFDPETAT
FEHVMSMILIVNEKFRENVAAWACFYDRKDVFKGFLERVLRHKSGRELSIAEKTNYLVFM
INAFQSLEDEIVSDTVLRLASLQSWHSLSYGRFQMELCFNPDLIRKWKRMIKREAKDAAK
RGEPFDPSTTLEVQFLRNLIEEFLEILDSKVLAPDPGMNEDYHLADAMRVDDACVLYCER
FMEFLIDLLSQLPTRRYLRPLVSDVAVVAKCHLSALYRHEKGKLFAQLVDLLQFYEGFEI
NDHVGTQLTDDEVLQSHYERVQSFQLLAFKKVPKLQELALANIGSIDKRNDLSKKLSVLS
PGELKNLVCSKLKLVSKDDPWSERVDFLIEVMVSFFEKQQSQKEKINALPLYPNELIMWD
ESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEVVPHLHAY
INNEGETAFRGWSRMAVPIKDFKISEVKQPNIGEVKPAAVTAQITFSISSYRGQMRSEWN
ALKEHDVLFLLSIRPSFEPLSAEEDGKASVPQRLGLQYVRGCEVIEIRDEEGTLMNDFTG
RIKRDEWKPPKGELRTVTVALDTAQYHMDVSNIAAKGAEDVYGTFNILMRRKPKENNFKA
ILESIRDLMNEYCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTFLDADHLKECF
PDDQVCFISPDGTENLNPRPPFRITLPKTMRSNTNALPGNKKSTNDVPMDNSDSEKEKIV
VEAYTPPDPGPYPQDQPRKNSVKFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQILN
VLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDFSRQGRV
NAMLVRRLELLSEVERLARSLQLPEDVGYTCETAGYFWLLHVYSHWEQFLAACKENKDKT
SFVKDRFPFKEFFSNTPKPVFTGESFEKDMRAAKGCFRHLKTMFQELEECRAFELLKSTA
DRANYLMTKQAKIVAMTCTHAALKRKDFLELGFKYDNLLMEESAQILEIETFIPMLLQRQ
EDGYARLKRCILIGDHHQLPPVVKNIAFQKYSHMDQSLFTRFVRLGIPYIELNAQGRARP
SIAKLYNWRYRDLGDLPYVKEGAIFHRANSGFSYEYQLVDVPDYNGRGESTPSPYFFQNV
GEAEYIVSVYIYMRLLGYPASKISILTTYNGQKLLIRDVINRRCAPYDFIGPPSKVTTVD
KFQGQQNDFILLSLVRTRIVGHLRDVRRLIVAMSRARLGLYVFCRRSLFEQCYELQPTFQ
RLLQRPDHLALNLNEIKSNTERHVEETGPIHLVSSVDEMIGIYQQLYEVKFHQYMPYSGQ
VGELLPIDTDVHHPMDTDMPVTSEGAPDDSAQHGSNMEEDTKGGVVANGQNTESLFKNHS
NGETDAKASVPPESNSDETELEE
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggtgtatggaacagggccgtacgatttcaagcgccaccatgtcgccgagtac
ccgctcgagtacccggtcgaggccaagcccggttcggcgcttcctagctcgataacgctg
tcggagattcagcgggaccggctcacgatgattgccgccgataattggtccaaaacccta
gacgcctcgaagcccaagaagcccttcgaaccggagctagtgaaggtgatttatcggacg
gagttgtcagttgaagagggtcagagaagggccgtcccgtcacagagggtgatgattctg
gaggtcagtcagtacttggagaactatctgtggccaaattttgaccccgaaaccgcgacc
ttcgagcacgttatgtccatgattctcattgtcaatgagaagtttcgagagaatgtagca
gcttgggcgtgcttttatgaccggaaagatgtgttcaaaggattccttgagagggttctt
cggcataaatcgggaagagagttaagcatagctgagaagacaaattatttagtgttcatg
attaatgcctttcagagtttggaagatgagatcgtgagcgatactgtccttaggttagca
agtttgcaatcttggcacagtctgtcgtacggtcgttttcagatggaactttgttttaat
cctgatttgatcaggaaatggaaaaggatgataaagagggaggccaaagacgctgcaaaa
cgcggagagccatttgacccttcaactacacttgaagttcagttcttgagaaacctcatt
gaagagttccttgagatacttgattccaaggttttagcccctgatcctggcatgaatgaa
gattatcaccttgctgatgctatgcgtgtcgatgatgcttgtgttttgtactgtgagagg
tttatggaatttcttattgacctcttgagccaactaccaacaaggaggtacttgaggcca
cttgtttctgatgtggctgtagttgccaaatgccacttgagtgctctgtatagacacgag
aaggggaaactctttgcacagttggtcgacttgctgcagttttatgaaggatttgagatt
aatgatcatgttgggacacaactgacagatgatgaggtgcttcaatctcattacgaacgc
gtgcaatctttccagctacttgcatttaaaaaggttcctaagttgcaagagcttgctttg
gctaacattggttcgattgacaagcgcaatgatctctcaaagaaattgtctgttctttct
cctggtgaattgaagaatttggtttgttcaaagctgaagctggtttcaaaggatgatcca
tggtctgaaagggttgatttccttattgaagtcatggtttcctttttcgaaaagcaacag
tctcaaaaggaaaaaataaatgcccttccactgtacccaaatgaactcatcatgtgggat
gaaagccttgtgccaagcatcaattactctggagaaggttgtctggccctaccaaaactg
aacttgcaatttttaacattacatgattatctcctcagaaatttcaatctctttcgtctc
gaatcaacatatgagattcgtgaggatattcaggaagttgttccgcatctgcatgcgtac
attaataatgaaggagaaactgcttttcgtggttggtcaaggatggcagtgccaatcaaa
gattttaagatcagtgaggtaaaacagccaaatattggagaagtcaagccagctgctgtg
acagcacaaattacttttagcatttctagttatagaggacagatgagatcagaatggaat
gctcttaaagagcatgatgtcctttttttactttctattcgtccttcctttgagcctcta
agtgcagaagaggatggcaaggcgagtgtgccccagaggcttggtcttcagtatgtacgg
ggttgtgaagtcattgagattcgtgatgaagagggaactctaatgaacgattttactgga
aggattaaacgggatgagtggaagcctccaaaaggagaactgagaactgtgaccgttgct
ttagatacagcacaataccacatggatgtcagcaacattgctgcaaaaggcgcagaagat
gtttatgggacattcaatatattgatgaggagaaagcccaaggaaaataactttaaagca
attttggaatccattagagatcttatgaatgaatattgtattgttccggactggttgcac
aacatttttctggggtatggtaatccttctgctgcacaatggactaatatgccggatctt
ttggaaactgtggattttaaagatactttccttgatgcagaccatttgaaagaatgtttt
ccagatgatcaggtttgttttattagtccagatggcacagaaaacttgaatccaaggcct
ccttttcgaataacacttcccaagacaatgagaagcaacaccaatgctcttccagggaat
aagaaatctactaatgatgtccccatggataattccgatagtgagaaagaaaaaattgtt
gttgaagcatacacacctcctgacccaggtccgtatccccaagatcagccaaggaagaac
tctgttaaatttacacccactcaggtcggagcaatcatctcaggtattcagccaggacta
acaatggtcgtgggtccacctggtacaggaaaaactgataccgctgtccaaattctgaat
gttctttatcataattgtccgtctcagagaacattgataattactcattcaaaccaggct
ctaaatgacctttttgagaagattatgcagagggatgtgcctgcacgctatcttcttcga
cttgggcaaggagagcaagagctagcaactgatctggacttcagccgacaaggccgtgtc
aatgccatgcttgtgcggcgcttagagttgctaagtgaagtggagaggctggctagatca
ctccagttgcctgaggatgtaggttatacatgtgaaactgctgggtacttttggttgctt
catgtttactcgcattgggagcaattccttgctgcttgtaaggagaataaagataaaaca
tcatttgttaaagatcgttttcccttcaaggagttcttctccaacacaccgaaaccagtc
tttactggtgagtcatttgagaaagatatgcgggcagccaagggttgctttcgtcatctg
aagaccatgtttcaagagcttgaagagtgtagggcgtttgagttactgaagtctactgct
gatcgagcaaattacctgatgaccaagcaggcaaagatagttgccatgacatgcactcat
gcagctctaaagagaaaggatttccttgagttaggtttcaagtatgacaacttgctcatg
gaagaaagtgctcaaattttggagattgaaactttcataccaatgttgctccagaggcag
gaagatggttatgctcggcttaaacgctgcatcctgattggtgatcatcaccagttgcct
cctgttgttaagaatatagcattccaaaaatacagccacatggatcagagtctctttact
aggtttgtccgattgggcattccttatattgaacttaatgcccagggtagagccaggcca
agtatagccaaactgtacaactggagatacagagatctgggtgaccttccatatgtaaag
gagggtgccatatttcatagagcaaattctggattttcctatgaataccagttggtggat
gtgccagattacaatggcagaggtgagtctacaccttcaccttatttcttccaaaatgtg
ggggaagcagaatacattgtcagtgtctatatttatatgcgtctacttgggtacccggca
agcaaaatctccatattgaccacttacaatggccagaagcttttaatccgcgatgttatc
aacagacgttgtgctccatatgacttcataggccctcccagcaaggttacaacagttgat
aaatttcaaggtcagcaaaatgattttatactgctctctcttgtgcgtactcgcattgtg
ggtcaccttcgtgatgttaggagattgattgttgcaatgtctcgtgcccgactgggtctt
tacgtgttttgccgtcgttctttgtttgaacaatgctatgaacttcagcctacatttcaa
cgtctacttcagagacctgatcaccttgcccttaatttgaatgagattaaatcaaacact
gagcgtcacgttgaagaaactggtcctattcatcttgtcagcagtgttgatgagatgatt
ggtatctaccagcagctttatgaggtaaagtttcatcaatacatgccttattcaggtcaa
gtaggtgaactccttccgattgatacagatgtgcaccatcccatggatacagatatgcct
gtaacttccgaaggggcaccagacgatagtgcccagcatggaagcaatatggaagaagac
actaaaggtggtgtcgttgccaatgggcagaacacagaatcattattcaagaaccattca
aatggggagacagatgctaaagctagcgtgccacccgaaagcaattctgatgaaacagaa
ttggaagagtag
DBGET
integrated database retrieval system
