Malus sylvestris (European crab apple): 126628613
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Entry
126628613 CDS
T09027
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126628613
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126628613
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126628613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-RING_UBOX
zf-CCCH_9
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
126628613
NCBI-ProteinID:
XP_050154327
LinkDB
All DBs
Position
7:complement(924837..930645)
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AA seq
409 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGEHCEFSHDWKASPNNICTFYQKGACAFGNRCRYEHVKASRAQ
SFGSSSSTNSQPSLAIDSASLALPARTLTSGVSLAPLSLSELSASSSPFLPPSKPAWNCS
LDGDYDDDESSVGETRNTRPEDRAICSFAAVGNCPRGEKCPHIHGDICPSCGKHCLHPYR
PLEGEEHMKICEEKQKQLEALKCSQEIECSVCLERVLSKPTVAERKFGILSECDHPFCIS
CIRNWRSSSPTSGMDVNSALRACPICRKLSYFVIPSVIWYKSKEEKQEIVDSYKARLRSI
DCKHFDFGNGNCPFGTSCFYKHTVKPGSYVWKFHRPPPRRPPPRRPPPRRYDIAPMDVIF
HMFEHLEELDDYIFEDLENEDLNSWERESLMQMGLYTSDSSEAEIDLWP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagggttctctgcaagttttttgcacatggcgcctgtttgaaaggggagcat
tgtgagttttcacatgattggaaggcttcaccaaataatatatgtaccttttatcagaaa
ggagcttgtgcatttggtaatagatgcagatatgaacatgtcaaagcttctcgggctcag
tctttcggttcatcttcatcaacaaattctcagccatccctggctattgattctgcatct
ttggctcttcctgcaagaaccttaacaagtggagtttctcttgcgccactctctctttca
gaactctctgcttcaagtagtcctttcttacctccctctaaacctgcctggaattgttct
ctggatggtgattatgatgatgatgaaagtagtgttggggagactaggaatactagacca
gaagatcgtgctatttgttcatttgctgcagttggtaattgccctcgtggagaaaaatgt
cctcatattcatggagatatatgccccagctgtggaaaacattgcttgcatccttacaga
cctttggaaggggaggagcatatgaagatatgtgaggaaaagcagaagcaacttgaggct
ttgaaatgcagtcaagaaatagaatgcagtgtttgcctagaacgtgttttgtcaaagccc
acagttgctgagcggaagtttgggatactctcagaatgtgatcatcctttttgcatatct
tgtattagaaattggcgcagtagttccccaacatctggtatggatgtcaatagcgcattg
agagcttgtccaatatgtcggaagctgtcatactttgtcattccaagtgtcatttggtat
aagtcaaaagaagagaagcaggaaattgttgacagctacaaagcaaggctcaggtcaatt
gattgcaagcactttgattttggaaatgggaactgcccatttggaactagttgtttttat
aagcatacggtcaagccaggctcatatgtatggaaatttcacaggccacctccaagaagg
cctcctccgagaaggcctcctccacggcgatatgatattgcgcctatggatgtcatattt
catatgttcgagcacttagaagaattggatgattatatatttgaagatttagaaaatgaa
gatttaaactcatgggagagggagtcattaatgcagatgggtttgtatacaagtgactcg
agtgaagccgagatagatttatggccttga
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