Malus sylvestris (European crab apple): 126628659
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Entry
126628659 CDS
T09027
Name
(RefSeq) autophagy-related protein 18c-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126628659
Membrane trafficking [BR:
msyl04131
]
Autophagy
Other autophagy associated proteins
Others
126628659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
ANAPC4_WD40
EIF3I
BCAS3_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
126628659
NCBI-ProteinID:
XP_050154389
LinkDB
All DBs
Position
7:30505239..30508197
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AA seq
410 aa
AA seq
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MSSTVSTSRGMHSPARLGMHESPDSGASGSYNPLEPDVNDSETDLLSVSWNQDYGCFSAG
TSNGFRIYNCEPFKETFRRDLKSGGFKIVEMLFRCNILVLVGSGDNSQYPPNKVMIWDDH
QSRCIGEFSFRSEVRAVKLRRDRIVVVLEHKIYGYNFMDLKLLHQIETVANPRGLCSLSH
HPNTSVLACPGLQRGQVRIEHFGLNLTKLINAHDSHIACLTLTMDGLLLATASNKGTLIR
IFNTMDGTRLQEVRRGVDRAEIYSIALSPNVQWLAASSDKGTVHIFSLRVRVFGEVLSAH
NSAQGAAMFQQNSSNSLDPLISPSTGANSSSSLSFMGGVLPKYFSSERSFARFHLPEDTQ
FITAFGSQNTVIIVGMDGSFYKCSFDPVNGGEMVQQEYVRFLKTESRRPG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacagtgtcaacatctcgaggaatgcattcacccgcaaggcttggcatgcat
gaatcaccggattctggggcttctggttcttacaacccgctcgaaccagatgtcaatgac
agtgaaacggatttgctctctgtatcgtggaatcaggactacggttgcttttctgcaggc
acaagcaatggttttcgaatctacaactgcgagcctttcaaagaaacttttaggcgtgat
ttgaaaagtgggggattcaaaattgtggagatgctattccgatgcaacattcttgtactt
gttggtagcggggacaattcacaatatccgcctaacaaggttatgatttgggatgatcat
cagagtcgatgtattggtgaattttcattcagatctgaggttcgtgctgtaaagttaagg
cgtgatcgcatagttgtggttcttgagcacaaaatatatggttacaactttatggatctg
aagctgctgcatcagattgagactgtagcaaatcctaggggattgtgcagcctttcacac
catccaaatacatctgtgctggcttgcccgggccttcaacgaggacaagttcgaattgaa
cattttgggctgaacttgacgaagttaatcaatgctcatgattctcatattgcatgcttg
accttaacaatggacgggctgcttcttgcaactgctagtaataagggtactttgataaga
atcttcaacacaatggatgggactcgcttgcaagaggtacggagaggagtggacagagca
gaaatttacagtattgctctttctccaaatgttcagtggttggcagcatcgagtgataaa
ggcactgtgcatatattcagcctcagagttagagtattcggggaggttctttctgctcat
aattctgctcaaggggcagcaatgtttcagcagaactcttcaaattccctggatcctctt
atttctccaagcaccggtgccaattctagttcatcattgtctttcatgggaggggtttta
cctaaatattttagctcagaacggtcatttgctcggttccacttgccagaagacactcaa
ttcattactgcatttggttctcaaaacactgtcatcattgttggcatggatgggagtttc
tacaagtgcagttttgatccagtaaatggaggtgagatggtgcagcaggaatacgtacgc
tttctgaaaaccgaaagcaggcggcccggttag
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