Malus sylvestris (European crab apple): 126628670
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Entry
126628670 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126628670
KO
K19022
AP-5 complex subunit beta-1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126628670
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
126628670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
126628670
NCBI-ProteinID:
XP_050154406
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All DBs
Position
7:24780760..24785969
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AA seq
1149 aa
AA seq
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MTDKPPEAPSPSPPSPPPLRQLSPQDWESLIDDFQHGGARQDRWTSAQPILLSLLDQALS
SIAKRDFPLKLHVITFLEEFSDPLFSTAIANDAVSGRKVLHRLIETLRALIQTPPDGVHI
TFALKEQMMISVTSVVVSLDDDVVPISTVESLVELLLTVINRPNHGVDRQARAVACECLR
EMEKARPSLLSEIGGHLWSLCQNERTHAAQSYILLFTTVVHNIVIENLSVSILNTTAPLV
PFSSPQNGSGKEGSGGLNYKELRRAMAFLLEWPQVLTPCAMVEFLALVMPMAAALELQAS
MLKVQFFGMVYSSDPMLCHVVLTMFPRFWDAFDGQEGDIAWRLVLLSKESQHHLVFRLLA
VHWLLGFGQLVLRREVKKVKTIVDMGSRFYPSVFDPLALKALKLDLLAFCSVCVDVLKPE
KSDSGEDGEVNDKLVVKLFEDGLVCVSAFKWLPPRSTETSVAFRTLHRFLIGASSHSDND
PSTTRSLMDSTTFRNIQGMLVDLMLECRRLVPVVVVLTDRLLGCQKHRWLGERLLQAFDE
HLLPKVKLDYSLVSFFPIFDRIAESDTIPPCGLLELLTKFMAFLVGKHGPYTGLRSWSQG
SRVLGICRTLLMHHKSSRLFLRMSRLLAFTCLYFPDLEVRDNARIYLRLLICVPGKKLRD
LLNLGEQLSISPSSHANFNVQTPRFSHSLKKSKTVSSYVHLERVIPLLVKQSWSLSLSSL
GIGSSDPGYLGGITDIEPIIEDSDIDDSSDVQIAPEAQAIDDNNNVQIIPEDRRIDQPPE
PLRVTDSKLSEILRMLRMHFSCIPDFRHMPGIKVRLSCSLRFESEPFNRIWGVDCHAGGS
NELDALPAIYATVLKFSSSAAYGSIPSYHIPFLLGEPPRKTNIPDQTASLAIVPVENACG
EEEPYRAPVTIELEPREPTPGLIDVSIETSAESGQIIRGQLHTITVGIEDMFLKAIVPPD
IQNDSIPGYYLDLFSALWEACGTSNTARETFQLKGGKGVTAISGTRSVKLLEVPASSLIQ
ATERYLAPFVVSVIGEPLVTTVKEGGIIRDIIWKDEASDSSLDITSSETNFHRGPLHLTY
GDDAEERDSPVNTRKTNMGSFLILIFLPPRYHLLFQMEVSDVSTLVRIRTDHWPCLAYTD
DYLEALFLA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagccaccagaagcaccatctccgtcaccgccgtcacctccgccattaagg
caactctctccccaagactgggagtcgttaatcgacgacttccagcacggcggcgcacgc
caggacagatggacctccgctcagccgatactcctctccctcctcgaccaagccctctcc
tccatcgccaagcgcgacttccccctcaagctccacgtcatcaccttcctcgaggagttc
tccgacccgctattctccactgccatcgctaacgacgccgtttccggacgcaaagtcctc
caccgcctcatcgaaaccctacgcgccctgatccagacaccgcccgatggggtccacatc
acgttcgccctcaaggagcagatgatgatctctgtcacctccgtcgtcgtctctctcgac
gacgacgtcgttccgatctccaccgtcgaatcgctggtggagctgctgttaaccgtgatc
aaccgtcccaatcatggcgtcgaccgtcaggcgcgtgccgtggcgtgcgagtgcctgcgc
gagatggagaaggctcggccctccttgctctctgaaatcggcggacatctctggagcttg
tgccagaacgagaggactcacgccgctcagagctacattctgttgttcaccaccgtcgtt
cacaacatcgtcatcgaaaatctcagcgtttcaattctcaatacgacggcgcctttggtg
ccgttcagttcgccgcagaacgggtcaggtaaggagggttcgggtgggttgaattacaag
gagctgaggagggcaatggcttttctgctagagtggccgcaagtgttgacgccgtgtgcg
atggttgagttcttggctctggtaatgccaatggcggcggcattggagctccaagcttcg
atgctcaaggtccaattttttgggatggtttattcgtctgatcctatgctctgccatgtt
gttttgaccatgtttccgaggttctgggacgcgtttgatgggcaggaaggcgacattgca
tggaggcttgtgctgctatccaaagaatcgcagcaccacttggtttttcgattgctggcg
gtgcattggttgcttggttttggtcagttagtgttgagaagggaagtaaagaaagtgaag
accattgttgatatgggttcgagattctatccgagtgtgttcgatccccttgctttgaaa
gccttgaagcttgacctgcttgcgttttgctctgtttgtgttgatgtcttgaaaccggag
aagagtgattcgggcgaggatggtgaggtgaatgataagttggtggtgaagttgtttgaa
gatggacttgtttgtgtatcagcattcaaatggttgcctccgcgaagtactgaaacctcg
gtggcatttcgaactttgcacaggttcttgattggagcttcgtctcattcagacaatgat
ccttccaccaccagaagtctcatggactccaccactttcaggaatatacaggggatgttg
gtggacctgatgttggagtgtcggagattggtccctgtggtagttgttttgactgatcgc
ttgttgggttgtcaaaagcaccgttggttgggagagcgcctgcttcaggcatttgatgag
catttgcttccaaaagtgaaattggattacagtttggtttctttctttccaatatttgat
agaattgctgaaagtgatacaattcctccttgtggattgctagagcttctcaccaagttc
atggccttccttgttggtaaacatggcccatatacaggactaagatcatggtctcaggga
agcagagttcttggcatctgtcgaaccttgttgatgcatcacaagagctctcgattgttc
cttagaatgtctcgccttttggcatttacttgcctctactttcctgatttggaggttcgt
gacaatgcaaggatctaccttcggcttcttatctgcgtgccgggaaagaagctcagggac
ctgctgaatcttggggagcaactcagtatttcaccgtcttcacatgccaatttcaatgtc
cagactcctcgcttttctcatagtctcaagaagtctaagactgtctcttcatatgtccac
cttgagcgcgtaatccccctactagtcaaacagtcttggtccttgtctttatcatctttg
ggtattggaagtagtgatcctggttacttaggaggcatcacggacattgaacccataata
gaggatagtgatattgatgacagtagtgatgtccagattgcaccagaagctcaagcaatt
gatgacaataataatgtccaaattatccctgaagatcgaagaattgatcaaccaccggag
ccattgcgtgtgacggattcaaagctttcggagatattaagaatgctgaggatgcatttc
tcatgcattcctgacttcagacatatgccaggaattaaggttagactatcatgtagtttg
aggtttgaatctgagcctttcaatcgaatatggggagttgattgccatgctggtggttcg
aatgaattagatgcccttcctgctatatatgcaacagtgctaaaattttcatcctctgca
gcatacgggtccattccatcatatcatataccttttcttctaggtgagcctcccagaaaa
actaatatacctgatcagaccgcctcattagctattgttcctgtagaaaatgcttgtgga
gaagaggaaccgtatagagctcctgtaacgattgaattggaaccacgggaacccacgcct
ggtctaattgatgtttcaattgaaacaagtgctgaaagtggtcagataatcaggggacag
cttcacacaatcactgttggcatagaggatatgtttctcaaggctattgtaccacctgac
atccagaatgattccatacctggttattacttagatttgttcagtgctctttgggaggca
tgtggcacttcaaacactgcacgcgagacatttcagttgaaaggaggcaaaggggtcact
gctatcagtggtactcggtcagtcaagctacttgaagtccctgcatcatccttgattcaa
gctaccgagcgctatttggcacccttcgttgtaagtgtgattggtgaaccacttgttact
actgtaaaggaaggaggaatcattagggacataatctggaaggatgaggcctcagattcg
tcccttgatattactagctccgagaccaattttcatagaggcccacttcatcttacatac
ggtgatgatgcagaggaaagggacagtcctgtcaatacccgcaaaacaaatatgggtagc
tttcttattttgatatttcttccaccaaggtatcatcttctcttccaaatggaagtgtct
gatgtttcaacgttagtacgaattcgaactgatcactggccgtgcttagcgtatactgat
gattatttggaagcattatttttggcatag
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