Malus sylvestris (European crab apple): 126628748
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Entry
126628748 CDS
T09027
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126628748
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126628748
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
Pre-60S particles
Helicases
126628748
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
126628748
NCBI-ProteinID:
XP_050154494
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Position
7:complement(29766709..29770297)
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AA seq
591 aa
AA seq
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MDADSSNPNSALSDTRFCDLKPPLSELVLEALSEGGFEFCTPVQAATIPLLCSFKDVAVD
AATGSGKTLAFVVPMVEILRRASTTPKPQEVMGMIISPTRELSSQIYNVAKPFISTLPNI
KCVLLVGGGQVKSDMKQIEEEGANLLIGTPGRLFDIMERIDVLDLRNLEILILDEADRLL
DMGFQKQINDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVXAETKSSDSILR
KQLASSKTPSGLALEYLECEADKKPSQLVDLLVKNKSNKTIVYFMTCACVDYWGLVLPML
GPLKGFPLIALHGKMKQAARDKALASFTSLSSGVLLCTDVAARGLDIPGVDCIVQYDTPQ
DPNVFMHRVGQTARMGRQGTAIVFLLPKEETYVEFLRIRRVPLQERKCSDDVADVVPQIR
SAAKKDRDVMEKGLRAFVSYMRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPAMPEVKH
HSLSTEGFIPVEDINLEEIKFKDKSREKQRKKNLQSKKEAKQQEPKHQKTKKIPNASDAA
MKKKTGKQRRAIQTAEDDDELAREYRLIKKLKKGAIDESEFAKLTGTEDLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgactcttccaaccccaacagcgccttgagcgacacccgcttctgcgacctg
aagccgccgctctccgaactggttctggaagccctgtccgaaggcgggttcgagttctgc
actccggttcaagccgccacaatccccttactgtgcagcttcaaggacgtggctgtggac
gccgccaccggctcaggcaagaccctagcattcgtggtcccgatggtggagatactccgg
cgagcttcaaccactccaaaacctcaagaggtgatgggaatgattatatctccgacgagg
gagctgtcttcgcaaatatacaatgtcgcaaaacccttcatttcgacgctgccgaatatc
aagtgtgtgcttttggttggtggagggcaagtgaaatcagacatgaaacaaattgaggag
gaaggagccaacttgttgatcgggacaccgggaagactattcgacattatggaacgcatt
gatgtcttggatttgcggaaccttgagattttgattttagatgaggctgataggctattg
gatatggggttccagaagcagataaatgatattatgtctcgattacctaagctccgaaga
actggtctcttttcagctactcaaactgaggcagttgaggaactggctagagcaggacta
aggaatcctgtgagggtagaagtatgagccgaaacaaaatcgagtgattcgatattaagg
aaacaattagcctcttctaaaacaccttctggccttgcccttgagtatctggagtgtgag
gcagacaagaaaccgtcgcagcttgtggatcttcttgttaagaataagtctaacaagacc
attgtatacttcatgacttgtgcttgtgttgactactggggacttgttcttccaatgctt
ggccctttgaagggtttccctttgattgctctacatgggaagatgaaacaggccgcaagg
gacaaagctttagcctcatttacatctctctcaagtggcgtccttttatgtactgatgtt
gctgcacgtgggcttgacattccaggcgttgactgtattgtgcagtatgatacccctcaa
gacccaaatgttttcatgcatagagttggccaaacagctcgtatgggtagacaaggaact
gcgatcgtttttctattaccaaaggaggaaacttatgtggaattcttacggataagaaga
gttcctctacaagaaaggaaatgttctgatgatgttgctgatgttgttcctcagattcga
tcagccgcaaaaaaggaccgcgatgtcatggaaaagggattaagagcatttgtttcttac
atgcgtgcatataaagaacatcactgctcatacattttcaggtggaaagaacttgaaatc
gggaaattgggcatgggattcggactactgcagctccctgcaatgcctgaggtaaagcac
cactcgctttccacagagggtttcatccctgttgaagacatcaacttggaggagatcaaa
tttaaggataaatctcgcgagaaacaaagaaagaagaatctacaatcgaagaaagaagca
aaacagcaagaaccgaaacatcaaaaaaccaaaaagatcccaaatgcttcagatgctgca
atgaagaagaaaacaggtaagcaaagacgtgctatccagacagctgaagatgacgatgag
ttggcaagagaataccgcttgataaagaagctcaaaaagggggctatcgacgaaagtgaa
tttgcaaagttaacaggaacagaagacttgctttga
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