Malus sylvestris (European crab apple): 126628795
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Entry
126628795 CDS
T09027
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126628795
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126628795
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126628795
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126628795
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126628795
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126628795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
pP_pnuc_2
Nitroreductase
LEA_2
Motif
Other DBs
NCBI-GeneID:
126628795
NCBI-ProteinID:
XP_050154589
LinkDB
All DBs
Position
7:5578343..5594199
Genome browser
AA seq
1120 aa
AA seq
DB search
MTLMTPPPLDQQQQQQPQEEDEMLVPHSDLPDGPQPMEEAQAETNNAVDAPTVDDPLSAR
FTWPIESFSRLNTKKLYSDVFLVGGYKWRILIFPKGNNVDHLSMYLDVADSGNLPYGWSR
YAQFSLSIVNQVNSKYSIRKETQHQFNARESDWGFTSFMPLGELYDPSRGYIVNDRCIVE
ADVAVRKVIDYWSHDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND
NPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDAYDSFMQHDVQELNRVLSEKLEDK
MKGTVVEGTIQQLFEGHQMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEV
ERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQ
LDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERV
TKEDMKRALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIREVDKEKIICNVDEK
DIAEHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARNEDLLEQIGKNIYFDLVDHDKVR
SFRIQKQMPFNLFKEEVAKEFGIPVQCQRFWLWAKRQNHTYRPNRPLTPLEEAQSVGQLR
EVSNKSNNAELKLFLEVELGPDLLPLSPAEKTKEEILLFFKLYDPLKEELRYVGRLFVKG
SGKPIELLTKLNQMAGFSPDEKIEFFEEIKFEPNIMCEHIDEKATFRVSQLEDGDIICFQ
KSPQSGSSEQFRYPDVPSFLDYVRNRQVVRFRSLDKPKEDEFCLELSKFHTYDDVVERVA
QRLSLDDPSKVRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTTDVLYYEVLDIPLP
ELQGLKTLKVAFHHATKDEVVVHTIRLPKQSTVGDVIDDLKTKVELSHPNAELRLLEVFY
HKIYKIFPPNEKIENINDQYWTLRAEEIPEEEKNFGPRDRLIHVYHFMKDTAQNQVQNFG
EPFFLVIREDETLAEVKVRVQKKLQVPDEEYSKWKFAFLSMGRPEYLQDDDIVASRFQRR
DVYGAWEQYLGLEHADHAPKRSHTTNQNRHTFEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactccgccgccgctagatcagcagcagcagcagcaaccgcaggaggaa
gatgagatgctggtcccacactccgacctccccgacggtcctcagcccatggaggaagca
caagcagaaactaacaatgcagtggatgctccgacggtggatgatccattgtcagctaga
tttacatggccaattgagagcttttcaaggcttaatactaagaagctctattctgatgtt
ttccttgtaggaggctacaaatggcggatactaattttccccaaaggaaataatgtggat
catctgtcaatgtatctggatgttgcagattctggaaatttgccttatggatggagtaga
tatgctcagtttagcttgtctattgtcaatcaagttaatagtaaatactctattagaaaa
gaaacacagcaccaatttaatgctcgtgagagtgactggggtttcacttcattcatgcct
cttggtgaattatatgaccctagtagaggttatattgtgaatgatagatgcatagttgaa
gctgatgttgcagttcgaaaggttattgattactggtcacatgactctaaaaaggaaact
ggttttgttggactgaaaaaccaaggagctacttgttatatgaactctcttcttcagacg
ctgtaccatattccttattttagaaaggctgtgtaccatatgccaacaacggagaatgat
aatccatctggaagcatcccacttgccttgcaaagcttattttacaagcttcagtacaat
gatactagtgtagcgaccaaagagctgacgaagtcatttggatgggatgcatatgattca
ttcatgcagcatgacgtccaagaactcaatagggttctttctgaaaagcttgaagacaag
atgaaaggaactgttgtggagggtacaatacagcagttatttgaagggcaccagatgaac
tatattgaatgcatcaatgtggactataaatcaacgaggaaagaatcattttatgatctt
caattggatgtcaaagggtgtcgggatgtttatgcttcattcgataagtatgtggaagtg
gagcgccttgagggtgataataaatatcatgctgaacagtatggtttacaggatgctaag
aaaggtgtcctgttcattgattttccacctgtccttcaacttcagctaaaacgtttcgag
tacgattttatgcgggacaccatggtaaagataaatgatcgctatgagttccccttgcaa
cttgatcttgatagggagaatgggaaatatctgtcgcctgatgctgacaggagcgtccgc
aacctctacactcttcatagtgttttggtgcacagtggcggggtgcatggtgggcattac
tatgcttatatcaggccaaccctttctgatcagtggtttaaatttgatgatgaacgagta
acaaaagaagatatgaagagggctctagaggagcagtatggtggagaagaagagttaccg
cagacaaatcctgggttcaacaatgctccatttaaatttactaaatactccaatgcctac
atgcttgtttatatacgtgaagttgacaaggagaaaataatttgtaatgtggatgagaaa
gacattgcagaacatctaaggataagactgaagaaagaacaggaagaaaaggagcaaaag
agaaaggagaaagctgaagcgcacctttatactatcataaaggttgcgcggaacgaggac
ctgcttgaacagataggaaagaatatctattttgatcttgtggatcatgataaagttcgt
agttttcgtattcagaagcagatgcccttcaacctctttaaggaagaggttgccaaagag
tttggtataccagttcaatgtcaacgtttctggttgtgggcaaagcgtcaaaaccataca
taccggccaaatcgaccactgacacctcttgaggaagcacaatctgttggacagttgagg
gaagtttccaataagtcaaataatgcagagctaaagctgtttcttgaagtagaacttggg
ccggatttgttgcctctttctcctgctgagaagactaaagaagagattcttctatttttc
aaactttatgaccctttgaaagaagagctccggtacgttgggaggttgtttgtgaaggga
agtggtaagcccattgaattattgacaaaactaaaccaaatggctggtttcagtcctgat
gaaaagatagaattttttgaggaaataaagtttgaacctaatatcatgtgcgaacacatt
gatgagaaggcaactttccgtgttagtcagcttgaagatggggacatcatttgctttcaa
aaatcccctcagagtggaagcagcgaacaattccgttacccagatgttccttcattcctg
gattatgttcgtaaccgtcaggttgttcgctttcgttctttggacaagccaaaggaagat
gagttctgtcttgagttgtcaaagtttcacacctatgatgatgtagtggaaagggttgct
caacggcttagcttggatgatccatctaaagttaggctcacatctcataattgttactca
cagcaacctaaaccccaaccaatcaagtatcgaggagtggaacatttgtctgacatgctg
gtgcactacaatcagactacggatgtactctattatgaagtattagatatccctctccca
gagctgcaaggcctcaaaactttgaaagttgcttttcatcatgctaccaaggatgaagtt
gtggttcatactattagattaccgaagcagagcactgttggggatgtgattgatgacctt
aagacaaaggtggagttgtctcatcctaatgccgaactcagattgttagaagttttctat
cacaaaatctacaagattttcccgccaaatgagaagattgagaatataaatgatcagtac
tggacattgcgtgcagaagagatccctgaagaagagaaaaactttggccctcgtgatcgt
ctgatccatgtttatcattttatgaaggacacagctcaaaaccaggttcagaatttcgga
gaaccatttttcttggtcattcgtgaggatgagacattagcagaagttaaagtgcgtgta
cagaaaaagttacaagtcccagatgaggagtattcaaagtggaaatttgcatttttgtcc
atgggtcgtcctgagtacctgcaagacgatgatattgtggccagccgatttcagagaagg
gatgtgtatggagcatgggaacagtaccttggattggaacacgctgatcatgctcctaaa
aggtcacacacaacaaatcagaatcgtcacacctttgagaagccagtgaaaatctacaac
tga
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