Malus sylvestris (European crab apple): 126628803
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Entry
126628803 CDS
T09027
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126628803
03083 Polycomb repressive complex
126628803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126628803
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
126628803
Histone modification proteins
HAT complexes
HATB complex
126628803
HDAC complexes
Sin3A-HDAC complex
126628803
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
126628803
PRC2.2
126628803
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
126628803
Heterochromatin formation proteins
Other heterochromatin formation proteins
126628803
Chromatin remodeling factors
NuRD complex
126628803
NuRF complex
126628803
NuRF complex (fruit fly)
126628803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD_LRWD1
eIF2A
Beta-prop_RIG_1st
MIOS_WD40
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
126628803
NCBI-ProteinID:
XP_050154595
LinkDB
All DBs
Position
7:complement(8689235..8693957)
Genome browser
AA seq
422 aa
AA seq
DB search
MGKDDEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRAEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVFVFDYSKHPSKPPIDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATAKNKTLEAMQIFKVHEGVVEDVAWHLRHE
NLFGSVGDDQYLLVWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPEEPA
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagacgacgaagaaatgaggggagagatagaggagcggttgataaacgaggag
tacaagatatggaagaagaacactccgtttttgtacgatctggtcataacccatgcccta
gaatggccatcgcttactgtggagtggcttcccgaccgagaggagcctccggggaaggac
tattcggtgcagaagatgattttggggacccacacctccgagaacgagccgaattacctt
atgctcgctcaggttcagctgccgttggaggacgccgagaacgatgcgcggcattatgat
gatgatcgagctgaggttgggggtttcggttgcgccaatggaaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgggctcgttatatgcctcagaatccatttatt
attgccacaaagactgtcaatgctgaagtttttgtgttcgattatagcaaacatccatct
aagcctcccatagatggtgcatgcagtccggatttgaggctgaggggccacagcactgaa
ggatatggtttatcgtggagtaagtttaagcagggtcatttactcagtggttctgatgat
gctcagatatgcctgtgggatattaatgcgactgctaagaacaaaacccttgaagctatg
cagatatttaaggttcatgaaggtgtagtagaagatgtagcatggcatttgaggcatgaa
aacttatttggttctgttggcgatgatcaataccttcttgtatgggatctccggactcca
tcagttaccaagcctgttcaatctgtagttgctcatcaaagtgaggttaactgtttggct
ttcaatcccttcaatgaatgggttgttgcaactggatctactgacaaaactgttaagttg
tttgatctacgcaaaatcaatactgcactccacacctttgattgtcataaggaggaggtt
ttccaagttggttggaatccaaagaatgaaactatcttagcttcttgttgtcttggtagg
agactcatggtgtgggatcttagcagaatcgatgaagagcagacaccagatgatgcagaa
gacggccctccagagttgctttttattcatgggggtcacaccagcaaaatatctgatttt
tcgtggaacccctgtgaagattgggttatttctagcgtcgctgaagataacatactccaa
atatggcagatggcagagaacatttaccatgacgaagatgatttacctgaagaaccggca
aagccctag
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