Malus sylvestris (European crab apple): 126628832
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Entry
126628832 CDS
T09027
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126628832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126628832
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126628832
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126628832
Atg1 complex
126628832
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126628832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Kinase-like
Motif
Other DBs
NCBI-GeneID:
126628832
NCBI-ProteinID:
XP_050154633
LinkDB
All DBs
Position
7:35002034..35005652
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AA seq
618 aa
AA seq
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MDFQNNSQLESGKMEQIVSQFLLKSLHIVLDSRIPSLHPHDRSGDLSSPTQVRKSDKWFN
LILGDRPAALENLNFWHRSVMDPMIIDIILVRGGPSSSSVDNLYANSVEGTSVETIIERW
VVQYETPRAVAPQTGDTSASYKKTYKKSIILLRTLYSYMRLLPAYRIFRQLSTSSQTYNF
DIIYKVSSLRDPFSRVEEELMEEFSFAPVEAHPGRLSLSVNYRPTLADLNLEPSAPTPPR
IITDYVGSPATDPLRSFPSSGKGFSATSFPSRGARPPSGVPHQRPHSWTSGFHRPPPFMH
NRPLVGSPPAYRASPMSHDVGSPPIDTFANRGQNYRPLRHKRNMSADEYQLSPPFSPSPS
PSPPTYLSSGNFNPMQTRIRSGTAPVSIPLPMGSPRYLSPNFSDPSRNSLPPLSPRSTRN
DHSSQEFPSGIKAIRKLEVSRAGETHPGSSNHYIGQKVMKDSKDDSGRFSGLLSSSGSPR
VGFSRSSSRLSFQDDLDDFEFSCPFDVDDVDTSDSQASDGKRPSEFISQSLPMGRKSQDA
AVGVLVQMLRTAPPLRQDSSCYSSQSGKNEHEGGVATASGFFMPRKTSDALEELRSYRDM
KDLLLSKSGTRVLSKDES
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggactttcagaataattctcagctcgaatcggggaaaatggaacagatagtttcccaa
tttctattgaaaagcttgcatattgttttggactctaggattccttctcttcacccgcat
gatcgcagcggtgacctgtcatctccaactcaagtgagaaagagtgacaagtggtttaac
ttaatactaggagaccgccctgcagctcttgagaatttaaatttttggcacagaagtgta
atggatcctatgataattgacattatacttgttcgcggaggacctagttcttcttctgtt
gacaatctgtatgcgaattcagtggaggggacatctgttgagacaatcatagagaggtgg
gttgtccagtacgaaactccaagggctgtggctccccaaactggcgacacttcggcctct
tacaaaaagacatacaagaagtcaatcattcttttacgtactctttattcgtatatgaga
cttcttccagcttataggatctttagacagctaagtacatctagtcagacttacaatttt
gatattatctacaaggtgtcttcacttagagatccattctcaagggtggaggaggaactg
atggaggagttcagttttgctcccgtagaggctcatcctggccgcctttctttatctgtg
aattaccgtccaacactagctgatttaaatcttgagccttcagcaccaacgccaccgagg
ataattactgattatgttggtagtcctgccactgaccccctgaggtctttcccctcatca
gggaagggttttagtgcaacttcctttccgtcgagaggagcacgaccgccatctggtgtg
ccacaccaacgcccacacagctggacaagtggcttccacaggccacctccttttatgcac
aatagacccttagttggatctccacctgcatatcgtgcatctcctatgtcacatgatgtt
ggatctcctcccattgatacattcgccaacagaggtcaaaactatagacctctacgtcat
aaacgaaatatgagtgctgatgagtatcagctttcacctccattttcgccatccccatcg
ccatcacccccaacatacttgtccagtggtaatttcaatcctatgcaaactcgaattcgt
tcaggaactgcccctgtaagcatcccccttccaatggggagccctagatacttatccccc
aatttttctgatccaagtagaaattctcttcctcctttatcacccagaagcacaaggaat
gatcattcctcgcaagagtttccatctggaatcaaggcaatcagaaaattggaggtttca
agggccggagagactcaccctggaagttcaaatcattacattggtcagaaggtgatgaaa
gacagcaaagatgattcggggcgtttctcaggattgttgtcgtctagtggctcaccacgt
gttggattttctagaagctcgagtagattgtctttccaggatgatttggatgattttgag
ttctcatgtccttttgacgtggatgatgttgatacatcagattctcaagccagtgacggc
aaaaggccttcagagttcatatctcagtcactgccaatgggtagaaaatcacaagatgct
gctgtcggcgttctggttcagatgctgaggacagctccgcctctgcgccaagattcaagt
tgttactcatcgcagtctgggaagaatgaacatgagggaggagttgctacggcttctggt
ttctttatgcctcggaagacatctgatgcactggaggagctcagaagctaccgagatatg
aaagaccttctactctctaagagcggaacgcgggtgctttccaaagacgaatcataa
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