Malus sylvestris (European crab apple): 126629110
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Entry
126629110 CDS
T09027
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1-like
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126629110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126629110
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
126629110
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126629110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
HEAT
HEAT_ECM29
TOR1L1_N
Cnd1
HEAT_DAAF5
GNC1_N
CEP104-like_TOG
Htt_N-HEAT_1
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-GeneID:
126629110
NCBI-ProteinID:
XP_050154953
LinkDB
All DBs
Position
7:35039774..35049410
Genome browser
AA seq
1216 aa
AA seq
DB search
MANLAMTGILEKMTGKDKDFRYMATSDLLNELNKDSFKADSDLEIKLTSIIIQQLDDVAG
DVSGLAVKCLVPLVKKVSEPRVVEMTNKLCEKLLKDKDHRDIASIALKTIIAEISTQSLA
QSILLSILPQLVKGITDPGMNHEIKCECLDNLCDVLHKFGNLMATDHELLLSALLSQLSY
NQASVRKKTVSCIASLASSLSDDLLAKATTEVVQKLRNKGTKSEMTRTNIQMIGALSRAV
GYRFGPHLADTVPVLINYCTSASENDEELREYSLQALESFLLRCPRDISPYCDEILHLNL
EYLSYDPNFTDNMEEDTDDETHEEEEDDGSATEYTDDEDVSWKVRRAAAKCLSALIVSRP
EMLSKLYGEACPKLIDRFKEREENVKMDIFNTFTELLQQTGNVTKGQNDINEQSPRWLLK
QEVPKIIRSINRQLREKSIKTKVGAFSVLKELVVVLPDCLADHIGSLIPGIEKALNDKSS
TSNLKIEALIFTRLVLASHYPSVFHPYIKALSSPVLSAVGERYYKVTAEALRVCGELVRV
VRPNIEGVGFDFKPYVHPIYNAIMSRLTNQDQDQEVKECAISCMGLVVSTFGDNLDVELP
VCLPVLVDRMGNEITRLTAVKAFAVIAASPLKIDLSCVLEQVIAELTAFLRKANRPLRQA
TLGTLNSLIVAYGDKIGSAAYEVIIVELATLISDSDLHMTALALELCCTLMADRSSPVVG
LAVRSKVLPQALTLIRSSLLQGQALSALQNFFASLVYSANTSFDALLDSLLLSAKPSPQL
GGVAKQALYSIAQCVAVLCLAAGDKQCSSTVKMLTEILKDDSTTNSAKQHLALLCLGEIG
RRKNLGSHDHIENIVIESFQSPFEEIKSAASYALGNIAVGNLLKYLPFILDQIDNQQKKQ
YLLLHSLKEVIVRQSVDKAEFPDSSVEKILNLLFNYCESEEEGVRNVVAECLGKIALIEP
TKLVPALKVRTTSPAAFTRATVVIAVKYSIVERPERIDEILYPEIASFLMLIKDHDRHVR
RAAVLVLSTFAHNKPNLIKGLLPELLPLLYDQTVIKKELIRTVDLGPFKHIVDDGLELRK
AAFECVDTLLDSCLDQVNPSSFIVPYLRSGLDDHYDVKMPCHLILSKLADKCPSAVLAVL
DSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLHRISGGDCSLKFKNLMNEI
LKSQTLGDKYVSIRNE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttagcaatgaccggtatactggagaagatgacgggcaaggataaggatttc
agatatatggctacttctgatttactgaacgaattaaacaaagatagttttaaagctgat
tctgatctggagataaagttgacaagtattattatacagcaacttgatgatgttgctggt
gatgtatctggattggccgtgaaatgtctcgttccattagttaagaaggtcagcgagcca
cgagttgtggagatgacaaataagctttgtgagaaattgctaaaggacaaggatcatcgt
gatattgcaagcatagctttgaagactattattgctgaaatttccactcagtctcttgcc
cagtctattcttctatctattttgccgcagttggttaaaggaattactgatccaggaatg
aaccatgagatcaaatgtgaatgtcttgataacttatgtgatgttcttcataagtttggc
aatttaatggcaactgatcatgagctgctattaagtgctctcttgtctcagttgagctac
aatcaagccagcgtgaggaagaaaactgtgtcatgcattgcttcccttgcatcgagcttg
tcagatgatctgttagcaaaggcaaccactgaagttgtccagaaattgagaaataaaggc
acaaaatcagaaatgactcgaacaaatattcagatgattggtgctttaagtcgtgctgtt
ggatatcgttttggaccccatcttgctgacactgtcccagtgttaattaattactgcaca
agtgcatcagagaatgacgaggagcttcgtgaatacagcttgcaggcattagagagtttt
ctgcttaggtgccccagggacatttctccgtattgtgatgaaattcttcatcttaacttg
gaatatctaagttatgacccaaacttcactgataacatggaagaagatactgatgatgaa
actcatgaggaggaggaagatgatgggagtgcgacagaatatacagatgatgaagatgtc
agctggaaagttcgtagagcagcagctaaatgcttatcggcattaattgtatcacgtcct
gagatgctatcaaagctgtatggggaggcttgtccgaaattaattgacagatttaaagag
agggaggaaaatgtcaagatggacattttcaatacattcactgaactgttgcaacaaact
ggaaatgttacaaaaggacaaaatgacataaatgaacagagtccaaggtggctactgaag
caagaagtgccaaagatcatcagatctataaataggcagctacgtgagaaatctatcaag
acaaaggttggcgcgttttccgttttgaaagaacttgtggtggtcttgccagattgcctg
gcggatcacattggctcactcattcccggaattgaaaaggcattaaatgataagtcctct
acctccaatttgaagattgaagctcttatatttacaagattggtcttggcatcgcattat
ccttctgttttccatccttacatcaaggctctttctagtcctgttttatctgctgtgggg
gagcgttattacaaagtcacagctgaggcattaagagtgtgtggggaacttgtccgtgtg
gttcgcccaaatattgagggagttggttttgacttcaaaccttacgttcatccaatatat
aatgccataatgtcacgcttgacaaaccaagatcaagatcaggaggtcaaggaatgtgct
atatcttgcatgggtctagttgtgtcaacatttggggataaccttgatgttgagttacct
gtatgccttcctgtgcttgttgatcgaatgggaaacgagattactcgacttacagctgtg
aaggcatttgccgtcattgccgcttctccgctgaaaatagatctgtcctgtgtgttggag
caagtgattgcggagttgactgcattcctaaggaaggctaatcggcctttaagacaggca
acattggggaccttgaattccctaattgttgcttacggcgacaaaattggttcagcagct
tatgaagttattattgtagagcttgctacactgataagtgattcagacttgcatatgacg
gcccttgccctggaactctgctgcaccttgatggctgacaggtcaagcccagttgttggt
ttggctgttagaagcaaagttcttccgcaagcactaacattaattagaagctcattgctg
caggggcaagccctttcggctttgcaaaacttttttgcttccttggtgtattctgcaaat
acaagttttgatgccttgctagactctcttcttttgagtgctaaaccatctcctcagttg
ggtggggttgcaaagcaagctttgtattcaatagctcaatgtgtggccgtcctttgcctt
gctgctggtgacaagcaatgttcatctaccgtgaaaatgctcactgaaattctcaaagat
gacagcactacaaattcagctaagcagcaccttgctttgctgtgtctcggggagattggg
aggcggaaaaatctaggctcccacgaccatatagagaatattgtcattgagtcctttcaa
tctcctttcgaagagattaaatctgcagcctcctatgctcttggcaatattgctgttggt
aacctactcaagtatttgccttttatattggaccagattgacaatcagcagaaaaaacag
tacctcttgcttcattctctgaaggaggtcatagtaaggcaatctgtagataaagcagag
tttccagattccagtgttgagaagatacttaatttactttttaattactgtgaaagcgag
gaagagggtgttcgcaacgttgtagctgagtgtcttggtaaaatagcacttattgaaccc
acaaaacttgttcctgcactgaaggtacgaacaaccagtccagctgctttcacaagagct
actgttgtcattgcagttaaatattcgatagttgagaggccggagaggatagatgagata
ttgtatcctgaaattgcatcattcctgatgcttattaaggatcatgaccggcatgtgagg
cgtgcggctgtgttggttttaagtacatttgcccacaataagccaaatctgatcaagggg
ctcctgccagagttgttgccgcttctttatgatcaaactgtaatcaagaaagaattgatc
aggacagttgatctcggcccttttaagcacattgtagatgatggacttgagttaaggaag
gctgcatttgaatgtgtggacacattgctggatagttgtcttgatcaagtgaacccttcg
tcttttattgttccttatcttagatctggtctggatgatcattatgatgttaagatgcct
tgccatcttatcctctcaaagcttgcggacaagtgtccatctgccgtactggcagtgctg
gactcgttggtggatcctctccaaaaaactatcaactttaagccaaagcaagatgctgtc
aagcaagaagtagaccgcaatgaagacatgattcgcagcgctctgagagctattgcatcc
ttgcatcgtataagcggtggagattgcagccttaagttcaagaaccttatgaatgaaatt
ttaaaatctcaaacgctcggtgacaagtatgtttctatccgaaatgaatga
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