Malus sylvestris (European crab apple): 126629208
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Entry
126629208 CDS
T09027
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126629208
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126629208
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126629208
NCBI-ProteinID:
XP_050155114
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Position
7:26710071..26723747
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AA seq
331 aa
AA seq
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MASLPYAEVDFSLRSMAGRAEGFGRFAIGGLNGPVYFVTTLADDGPGSLREGCRKQEPLW
IVYEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIVCNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GNKKKTFEYYTEKAADREVAKSGFIISEGDLFLNGAQPCTLTGFSEECLFHPSEFYPQWT
MEAASDSLKAILQILTGWQSIHRPAEQAVTV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctaccgtacgccgaagtggattttagcctgagatcaatggccggtcgggcc
gagggctttggccggttcgccatcggaggcctcaacgggccggtctatttcgtcaccacg
ttggcagatgatggtccaggctcacttcgtgaaggatgccgaaaacaagaaccactctgg
attgtctatgaggtttctggcaccattcacctttcatcttacttgagcgtgtcgtcttat
aagacaattgatggacgaggtcagaggataaagctcacgggaaagggacttaggctgaag
gaatgtgagcatataattgtatgcaacctcgagtttgaaggtggtagaggacatgatgtt
gatggcattcagattaaaccaaactctaggcacatatggatagaccgatgcagccttcgt
gattatgatgatggactcatagatatcaccagacaaagtacagacataactatctctaga
tgttactttgcacaacatgacaagacgatgcttattggagcagacccctcgcacgttggt
gacagatgcattcgggtgacaatccatcattgtttttttgatggaacaaggcaaagacaa
cctcgtcttagatttgggaaagttcatctttacaacaattacactcgaaactggggtata
tatgccgtttgcgccagcgtagaatcccagatatactctcaatgcaacatttatgaagca
gggaataagaaaaaaacctttgaatattatacagaaaaggcagcagacagagaagtggca
aagtccggcttcataatatccgagggcgatctattcctcaatggagctcaaccatgcaca
ttgacagggttcagtgaagaatgcctgttccatccaagtgaattttatccacagtggact
atggaagcagcctcagattctcttaaagccattctccaaattcttactggctggcaatcc
attcatcggccagcagagcaggcggtaactgtatga
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