Malus sylvestris (European crab apple): 126629216
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Entry
126629216 CDS
T09027
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126629216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126629216
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
SR proteins
126629216
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
RNA_bind
Motif
Other DBs
NCBI-GeneID:
126629216
NCBI-ProteinID:
XP_050155128
LinkDB
All DBs
Position
7:32495889..32500710
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AA seq
409 aa
AA seq
DB search
MKPIFCGNFEYDARQNELERLFGRYGKVDRVDMKSGFAFIYMEDERDAEYAIRGLDRKEF
GRKGRRLRVEWTKVANQERGARRPGASRRSSTNTRPSKTLFVINFDPYHTRTKDLERHFD
SYGKIVSVRIRRNFAFVQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERGDGFSP
DRRSRDRSPDRGRDRRRSPSPYKRERGSPDYGRGPSPGPYRRERGSPDYGRAASPYRRER
VSSDYGRGRSPSPYRRDRSDHGRVSSRSPRKERVSADRVRDRTRSPYGRERPGDDNGHGP
SRSSYKRDRGSPENGPRRSPYKRERDSPRDSPENGRLPSSSPYKRERVSPENGGGPSGSP
YETERASPENGRVASLNSAPEARDSPNYGGPESPMNERYSSRSPQAEEE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattttttgtgggaattttgaatatgatgctcgacagaatgaattggagcgg
ctgtttggtagatatgggaaagttgatagggtcgatatgaagtctgggtttgctttcatc
tatatggaggatgagagagatgctgaatatgccattaggggacttgaccgaaaagaattt
ggtcgaaaaggacgcaggcttcgtgttgaatggacgaaggtagcaaatcaagaacgtggt
gctagaagacctggtgcatcaagaagatcttcgactaatacaagaccttcaaagaccttg
tttgttataaattttgatccttatcacacaaggaccaaagatttggagaggcattttgat
tcatatgggaaaatcgtcagcgtaaggatcagaagaaattttgcatttgttcagtatgag
tcacaagaggatgctaccagggcattggaagctacaaacatgagcaagctgatggatcga
gttatatcggtggaatatgcagttcgtgatgacgatgaaagaggagatggatttagccct
gaccggagaagtcgtgataggtctccagacagaggccgtgatagaagaaggtccccaagc
ccctacaaaagagagagaggtagccctgattatggccgaggccctagccctggtccctac
aggagagaaaggggtagtcctgattatggacgtgcagcaagtccttatagaagggagaga
gttagttctgactatggccgtgggcgcagcccaagtccatataggagggacaggtctgat
catggccgcgtctccagtcgtagtcctagaaaagagagggtgagtgctgaccgtgttcgt
gatcgtacccgtagtccttatggaagagagaggcctggggatgacaatggccatggtccc
agtcgtagctcatataagagagataggggtagtcctgaaaatggtcccagacgtagtcca
tataagagagaacgggatagtccaagggatagtcctgaaaatggccgtctcccaagcagt
agtccatataagagagagagggtcagtcctgaaaatggtggtggccccagcggtagtcct
tatgaaacagagagggccagcccggaaaatggtcgtgttgcaagcctaaattctgcgcct
gaagctagggatagccccaactatggcgggcctgaaagccccatgaatgagagatatagc
agccgttcaccgcaagctgaggaggaatga
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