Malus sylvestris (European crab apple): 126629276
Help
Entry
126629276 CDS
T09027
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126629276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126629276
Membrane trafficking [BR:
msyl04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
126629276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
126629276
NCBI-ProteinID:
XP_050155205
LinkDB
All DBs
Position
7:complement(27885631..27891744)
Genome browser
AA seq
1470 aa
AA seq
DB search
MGRLKLRSGIQEIEEEHGECDATHSNHATLACIINSEIGTVLAVMRRNVRWGGRYVSGDD
QLEHPLIQSLKAFRKQIFSWKHHMHSVNPSAYLRPFLDVIRSDETGAPITGVALSSVYNI
LTLDVINQNSLNVEDAMHLLVDAITGCRFEVTDPASEEVVLMKILQVLLACMKSKASVIL
TNQHVCIIVNTCFRIVHQAGTKGELLQRIARHTMHELVRCIFSHLPDVHHSEHALPNGSN
TIKGEIAGQNNEHASGSRQLENGNMISEFDSQLLSSNPALHASSGLVESGIDEKTAGGSS
RKEVDQYDVQLMAEPFGIPCMVEILDFLCSLLNVVEHIGMGPRYNTIAFDEDVPLFALGL
VNCAIELGGSSIRHHPKLLSLVQDELFQNLMQFGLSTSPLILSMVCSIVLNLYHHLRTEL
KLQLEAFFSCVILRLVQSRYGASYQQQEVAMEAVVDFCRQKTFMVEMYANLDCDITCNNV
FEELANLLSKSAFSVNLLLSSIHILALDGLIAIIQGMAERAGKGSVSAVQAPPMNLDEYT
PFWLMKCDNYSDPNHWVPFVRRRKHIKRRLMIGADHFNHDPKKGLEFLQGTHLLPDKLDP
ESVACFFRYTAGLDKNLVGDFLGNHDEFCIQVLNKFAGTFDFQDMHLDTALRLFLETFRL
PGESQKIQRVLEAFSERYYEQSPQILANKDAALLLSYSIILLNTDQHNVQVKKKMTEEDF
IRNNRHINGGDDLPLEFLSELYHSICKNEIRTTPEQGAGYSEMNPSRWIDLIYKSKKNAP
FIESDTRAYLDQDMFAIMSGPTIAAISVVFDHAEHEEIYQKCIDGFLYVAKIAACYHFED
VLDDLVVSLCKFTTLLNPSSYEEPVLAFGDDPKARMSTVTVFTIANTYGDHIRTGWRNVL
DCILRLHKLGLLSAFVASEAAGDSEFSADTGHGKAITNSLSSVPMPPLSTSRKSSGLMGR
FTQLLSLNTEEPRSQPTEEELVAHQRTLQTIQKCHIDGIFSESKFLQAKSLLQLAQALIW
AGERPQKGSSSPEDEDTAVFCLELLIAVTLNNRDRIMLLWQIVYEHISNIVQSTVMPCAL
VEKAIFGLLRICQRLLPYKEDLADDLLRSLQLVLKLDARVADAYCEQITQEVGRLVKANA
SHIRSQLGWHITTSLLSITAPHPEASEAGFDALFFIMSEGAHLLPANYVFCVDASRQFAE
SRVGEVARSVCALDLMAGSVDCLSRWASDANQSMNGEEAVKMSQDIGQMWLRLVQGLRKV
CLDQREEVRNHALSMLRKCLTGVDGIPLPHGLWLRCFDTVIFTMLDDLLEIAQGQSPKEY
RYMEGTLILALKLLSKVFLELLPELSQLTTFSKLWLGVLNRMENFMKVKVGGRKCEKLRD
QVLELLKNTLIVMILRGVLLEKGDVGDDNLWELTWLHVNKIAPSLQSEVSHDPFLEQSET
KQGESGRVSDATGTILPTETIPAEGSGGGG
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtctgaagctgcgaagtggaatccaggaaattgaggaagaacatggggaatgt
gatgcaacgcattctaatcatgctactttagcatgcatcattaattcagaaataggcact
gtattagcggttatgaggaggaatgtaagatggggaggacgctatgtgtctggtgatgat
cagctggaacaccctctaatccaatctttaaaggcgtttcgcaagcaaatcttttcatgg
aagcaccatatgcattccgtcaatccttctgcatatctccggccatttttggatgtgatt
aggtcggatgaaactggtgcaccaattactggtgtggctttgtcttctgtttacaatatc
ttaacacttgatgtaatcaatcaaaattccttaaatgttgaagatgccatgcacttatta
gttgatgcaatcactggctgccgatttgaggtgactgatcctgcatcagaagaagtggta
ttgatgaagatactgcaggttcttctagcttgcatgaagagtaaagcatctgttatattg
accaatcagcatgtttgcattatagtgaacacatgtttccgtattgtccatcaagcggga
acaaaaggtgagttgttgcagcggatagctcgccacacaatgcatgaacttgttagatgt
attttctcacaccttccagatgttcaccattctgaacatgcattgccaaatggaagcaat
accatcaagggagagattgcagggcaaaataatgagcatgcttctgggagtagacaattg
gagaatggcaacatgatttctgagtttgatagtcagctattatcttcaaatcctgctttg
catgcttcctcaggtcttgtagaatctgggattgatgaaaagacagctggtggttctagc
aggaaggaggttgatcaatatgacgtgcaactcatggctgagccatttgggattccctgc
atggtggaaatattggacttcctgtgttctttgttaaatgtggttgagcatataggaatg
ggtcccaggtataataccatagcttttgacgaagatgtccccctttttgcactgggtttg
gttaattgcgctatagagttaggcgggtcctccattcggcatcaccccaagttattaagt
ttggttcaggatgaattgtttcaaaatttgatgcagtttggcctatcaacaagtccactt
attctttcaatggtatgcagcattgtcctcaatctgtatcaccatctccgcactgaactt
aagctacagcttgaggctttcttttcatgtgtgatattgaggcttgtgcaaagcaggtat
ggggcttcttatcagcagcaggaggttgccatggaggctgttgtggacttctgccggcag
aaaactttcatggtggagatgtacgcgaacttagattgcgacataacttgcaataatgtc
tttgaagagcttgctaatctgttgtcaaagagtgcattctctgttaatttgcttttgtct
tcaattcacattcttgctttggatggccttattgctattattcagggaatggcagagagg
gcagggaagggctcagttagtgctgttcaggctccccctatgaatcttgatgagtatact
ccattctggttgatgaaatgtgacaactacagtgatccgaatcattgggttccatttgtt
cgccgaaggaagcacataaagagaaggctaatgattggagccgatcattttaaccatgac
ccaaagaaagggctggagttcctccaaggaacccatctcttgcctgacaaacttgatcct
gaaagtgtggcctgttttttcaggtacactgctgggttggataagaatcttgttggggat
ttcctgggaaatcatgatgagttttgtattcaggttcttaataaatttgctggtaccttt
gatttccaagacatgcatttggatactgcactgcgactgtttctggagacatttcgattg
cctggagaatcacaaaaaatacaaagggtgcttgaagcattctcagagagatattatgag
caatcaccacaaattctagctaacaaggatgctgctctcctgttatcatattcaattata
ttgctcaacacagaccagcacaatgttcaggtgaagaagaagatgacagaggaggatttc
attcggaataatcgacacatcaatggaggtgatgatttacctctagaattcctttcagag
ctttaccactcaatatgcaagaatgagatccgcacaactccagaacaaggtgctggttat
tctgaaatgaacccaagccgttggattgatttaatatacaaatctaagaagaatgctccc
ttcattgaatccgataccagagcctaccttgaccaggatatgtttgctataatgtcaggc
cccacaattgctgccatttctgtggtatttgaccatgcagaacatgaagagatttaccaa
aaatgcattgatggatttttatatgttgcaaagattgcagcatgctatcattttgaagat
gtgctcgacgatctggttgtgtctctttgtaagtttacaacccttttaaacccatcatct
tatgaggaacctgttttagcctttggtgatgacccaaaagctagaatgtcaacagtgaca
gttttcacgattgccaatacatatggtgatcacattcgcacaggctggagaaatgttctt
gactgtatcttaagattacacaaacttggtcttctgtcggcttttgtggccagtgaagca
gctggtgattctgagttttctgctgacacaggtcatggcaaggccataaccaattctctg
tcatccgttcctatgccccctctgagtacttctaggaagtcctctggattgatgggccgg
tttactcagctattatctcttaacactgaggagccgagatcacagcctactgaagaagaa
cttgtggctcatcagcgcacccttcagacaattcaaaagtgccacattgatggcatattt
tcagagagcaagtttctgcaggctaaatccctgttacagcttgcacaggcactcatctgg
gctggagaacgaccccagaaagggagcagctcacctgaggatgaagatactgcagttttc
tgtttggagttgctgatagctgttaccctaaataacagggataggattatgcttctttgg
cagattgtgtatgagcacatatcgaacattgttcagtctactgtgatgccttgtgccctg
gtagagaaggctatttttggacttcttcggatttgccagcggctgcttccctataaagag
gaccttgctgatgatcttttgcgatcattgcaacttgttttgaagcttgatgctcgggtt
gcggatgcatactgtgagcaaattacgcaggaagtcggtcgccttgtgaaagcaaatgcc
tctcacataagatcacaattggggtggcacataactacatcactactctccattactgct
ccgcacccagaagcttcagaggctgggttcgatgcactgttcttcattatgtctgaagga
gctcatttgttgcctgccaattatgttttctgtgttgacgcatcaaggcagtttgctgag
tctcgtgttggagaggtggcgcgatctgtatgcgcactggatcttatggcaggttctgtt
gattgtttatcaaggtgggcctctgacgctaaccaatctatgaatggggaagaagctgtg
aaaatgtctcaggatattgggcaaatgtggttgcggcttgttcaggggttgagaaaagtt
tgtttggaccagagagaagaggttaggaaccatgctttgtccatgttacggaaatgcttg
actggagtggatgggattcctcttccacatggcctgtggttacggtgctttgacacggtg
atcttcacaatgcttgatgacttgctagaaattgcacagggacagtccccaaaggaatac
cgctacatggaaggcacgcttatcctagccttgaagctcttgtccaaagtttttctggag
ctactacccgagctatcgcagttaacaaccttcagcaaactatggctgggtgttctcaat
cgaatggaaaattttatgaaggtgaaagttggagggagaaaatgtgagaagctacgggac
caagtgctggagctacttaagaacaccttaatcgtaatgattttaaggggagttcttttg
gagaaaggtgacgtaggagatgataacttgtgggagttgacatggctgcatgtaaataaa
attgcaccatccttgcagtctgaagtttcccatgatccatttttagagcagtcagagact
aagcagggtgaatcagggcgagtctctgatgcaacgggtaccatacttccaactgaaacc
attcctgctgaaggttccggcggtggaggttaa
DBGET
integrated database retrieval system
