Malus sylvestris (European crab apple): 126629732
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Entry
126629732 CDS
T09027
Name
(RefSeq) protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126629732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126629732
Spliceosome [BR:
msyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126629732
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
126629732
NCBI-ProteinID:
XP_050155796
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Position
7:complement(26441724..26446108)
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AA seq
872 aa
AA seq
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MEKDKSSKRDRRDRDRDYDKHRSRDADEKRSSKDSDYYRHHHRSDRDSKRERSREPRDHK
SRRERSRELSEDGRDVSRDHRERSYEPRDEREGSRERSRHREAKRERSEEREESKRKRKE
RESEGRDGEGDDLEDKKRSRVSEGERKERKRFEEDGKEVNGGQKKSRRFGDRRVKEEEGG
ENGEVVERRTELNVNASEVNVKKEEVGDDHIGNFQSVAATPNGSGRVGNGAALEPTMTSR
IVPETSFAPIHPLPTKVSSIPTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSANLSLGD
VEKIKRTLQKQKELTEKLKKLNQLKKEGNSSKDASQNLESKEGLKPPATTAGLLHAPTPS
TAVTTAASVATFDSSALPISAAAVPNFEAVKRAQALAAQMGFRQDPDFSPLINSFPGQVA
TDVAAPQKPTKAPVLRLDALGREIDEHGNLVNVTKPNNLSTLKVNINKQKKDAFQILKPE
LDVDPEKNPHFDPDVGISKKFLRPKRMGFAFVEEGKWTRDAELIKLKTKFGEAQAKEQRA
KQQQFAKAKAAPDINPNLIEVGERVITKEKPKDPIPEIEWWDVPLLHSGTYKEVVDGTVA
EDKLKIEKITIYIEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQEMIR
QGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHVDRNIARKLTPAER
REKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSCVISDGINVVVV
EGGSKSIKRYAKVMLRRINWAEAVKEEEEDDDADDDKPPNKCVLVWQGSVARRSFNRFSV
HECMTEAAARKVFADAGVAHYWDLAVNFQDDN
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacaaatcgagcaaacgcgaccgcagagatcgagacagagactacgataaa
catcgcagccgtgatgccgacgaaaagcgatcgtcaaaggactccgattactaccgccac
caccaccgatcggaccgcgattccaagcgtgagcgctctcgcgagccccgcgaccacaaa
tctcgccgcgaacggtcgcgcgagctgagcgaagacggccgggatgtctcgcgcgaccac
cgtgagcggtcctacgagccgagggacgagagggaagggagcagagagaggtccaggcat
cgggaagcgaagcgcgagaggtcagaggagcgagaagaatcgaagcgtaagaggaaagaa
agggagagtgagggtcgagatggagagggtgatgatttagaagataagaagaggtctagg
gtttcggagggggagaggaaagagaggaagcgattcgaggaagatggtaaggaagtgaat
ggtggtcagaaaaagagtaggaggtttggtgaccgccgagtaaaggaggaagagggcgga
gagaatggcgaagttgttgaacggagaactgaattaaatgtgaatgcgagtgaggttaat
gttaagaaagaagaagttggggatgatcatattggcaatttccagagcgtcgccgccacc
ccaaatgggagtggtcgggtgggtaatggcgctgctctggaacctactatgacatcaagg
attgtgcctgagacctctttcgctcccattcatccccttcctaccaaggtatcttcaatt
cctacaacaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaa
tctagtacagatggaacatcttcaactgctgggaaaagtgcgaatctgtctcttggtgat
gtagaaaaaatcaagagaactttacagaagcagaaggaattgactgagaagctgaagaag
cttaaccagttgaagaaggaaggcaattcaagcaaagatgctagccagaacttggaatcg
aaggagggactgaaaccaccagctactactgctgggttgctacacgcaccgaccccatca
acagctgttactacagctgcttctgtggcaacatttgattcgtctgccctacccatatct
gcagcagccgttcccaactttgaagctgtaaaacgtgcacaagcacttgctgctcagatg
gggttccgtcaggaccctgatttttctcctctcataaactcgtttccaggacaggtggct
actgatgttgctgccccgcagaagcctactaaagcccctgttcttcgtcttgatgctctt
ggaagggaaatagatgaacatggaaacttagtgaatgtgacgaaaccaaacaacctcagt
accctaaaggtcaacattaacaaacagaagaaagatgcattccagattcttaaacctgaa
ttggatgtggatcctgaaaagaatcctcattttgatccggatgtgggcatcagtaaaaaa
tttttgaggccaaagaggatgggtttcgcgtttgtagaggaaggaaaatggacaagagat
gctgagcttataaaattaaagactaaatttggagaagcacaagccaaagagcaaagagca
aagcagcaacagtttgcaaaggcaaaggcagcgccagatattaatccaaatttgatagaa
gtaggagagagagttatcaccaaagaaaaaccaaaggatccaattcctgaaatcgagtgg
tgggatgtgccactgttgcactctggtacttataaggaagttgttgatggtacagtagct
gaagataaattaaagatagagaaaatcacaatctatattgaacatcctcaacctattgag
ccccctactgagccagctcctccaccgcctcaaccactgaagctgaccaagaaggagcag
aaaaaactacgtacacagaaacgtctggccagagagaaagataggcaggagatgattaga
caaggcctgcttgagcccccaaagccaaaagttaaaatgagtaatttgatgaaagttctt
ggctctgaagcaacccaagatccaaccaggcttgaaaaggagatcaggagtgcagctgct
gaacgtgaacaagctcatgtagacaggaatatagcacggaagctcactcctgccgagcgt
cgtgagaagaaagaaaggaagctttttgatgaccctaataacgtggagacaatcgtctca
gtttacaggatcaatgagctgtcacatccaaaggcccgcttcaagatagatgttaatgcg
cgagagaaccggctgactggatcttgtgtgatatcagatggtattaatgttgtggttgtt
gaaggtggaagcaagtctatcaagaggtatgcaaaggttatgcttaggcgcataaactgg
gctgaggcagtaaaagaagaggaagaagatgatgatgctgacgatgacaagcctcccaac
aagtgcgtgttagtatggcaaggaagtgttgcaagacggagcttcaataggttttctgtt
catgaatgcatgactgaagccgctgcccggaaggtttttgccgatgctggcgttgctcat
tactgggatcttgcggtcaactttcaagatgataattag
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