KEGG   Malus sylvestris (European crab apple): 126629732
Entry
126629732         CDS       T09027                                 
Name
(RefSeq) protein RDM16-like
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126629732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126629732
Spliceosome [BR:msyl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    126629732
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 126629732
NCBI-ProteinID: XP_050155796
LinkDB
Position
7:complement(26441724..26446108)
AA seq 872 aa
MEKDKSSKRDRRDRDRDYDKHRSRDADEKRSSKDSDYYRHHHRSDRDSKRERSREPRDHK
SRRERSRELSEDGRDVSRDHRERSYEPRDEREGSRERSRHREAKRERSEEREESKRKRKE
RESEGRDGEGDDLEDKKRSRVSEGERKERKRFEEDGKEVNGGQKKSRRFGDRRVKEEEGG
ENGEVVERRTELNVNASEVNVKKEEVGDDHIGNFQSVAATPNGSGRVGNGAALEPTMTSR
IVPETSFAPIHPLPTKVSSIPTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSANLSLGD
VEKIKRTLQKQKELTEKLKKLNQLKKEGNSSKDASQNLESKEGLKPPATTAGLLHAPTPS
TAVTTAASVATFDSSALPISAAAVPNFEAVKRAQALAAQMGFRQDPDFSPLINSFPGQVA
TDVAAPQKPTKAPVLRLDALGREIDEHGNLVNVTKPNNLSTLKVNINKQKKDAFQILKPE
LDVDPEKNPHFDPDVGISKKFLRPKRMGFAFVEEGKWTRDAELIKLKTKFGEAQAKEQRA
KQQQFAKAKAAPDINPNLIEVGERVITKEKPKDPIPEIEWWDVPLLHSGTYKEVVDGTVA
EDKLKIEKITIYIEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQEMIR
QGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHVDRNIARKLTPAER
REKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSCVISDGINVVVV
EGGSKSIKRYAKVMLRRINWAEAVKEEEEDDDADDDKPPNKCVLVWQGSVARRSFNRFSV
HECMTEAAARKVFADAGVAHYWDLAVNFQDDN
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggagaaagacaaatcgagcaaacgcgaccgcagagatcgagacagagactacgataaa
catcgcagccgtgatgccgacgaaaagcgatcgtcaaaggactccgattactaccgccac
caccaccgatcggaccgcgattccaagcgtgagcgctctcgcgagccccgcgaccacaaa
tctcgccgcgaacggtcgcgcgagctgagcgaagacggccgggatgtctcgcgcgaccac
cgtgagcggtcctacgagccgagggacgagagggaagggagcagagagaggtccaggcat
cgggaagcgaagcgcgagaggtcagaggagcgagaagaatcgaagcgtaagaggaaagaa
agggagagtgagggtcgagatggagagggtgatgatttagaagataagaagaggtctagg
gtttcggagggggagaggaaagagaggaagcgattcgaggaagatggtaaggaagtgaat
ggtggtcagaaaaagagtaggaggtttggtgaccgccgagtaaaggaggaagagggcgga
gagaatggcgaagttgttgaacggagaactgaattaaatgtgaatgcgagtgaggttaat
gttaagaaagaagaagttggggatgatcatattggcaatttccagagcgtcgccgccacc
ccaaatgggagtggtcgggtgggtaatggcgctgctctggaacctactatgacatcaagg
attgtgcctgagacctctttcgctcccattcatccccttcctaccaaggtatcttcaatt
cctacaacaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaa
tctagtacagatggaacatcttcaactgctgggaaaagtgcgaatctgtctcttggtgat
gtagaaaaaatcaagagaactttacagaagcagaaggaattgactgagaagctgaagaag
cttaaccagttgaagaaggaaggcaattcaagcaaagatgctagccagaacttggaatcg
aaggagggactgaaaccaccagctactactgctgggttgctacacgcaccgaccccatca
acagctgttactacagctgcttctgtggcaacatttgattcgtctgccctacccatatct
gcagcagccgttcccaactttgaagctgtaaaacgtgcacaagcacttgctgctcagatg
gggttccgtcaggaccctgatttttctcctctcataaactcgtttccaggacaggtggct
actgatgttgctgccccgcagaagcctactaaagcccctgttcttcgtcttgatgctctt
ggaagggaaatagatgaacatggaaacttagtgaatgtgacgaaaccaaacaacctcagt
accctaaaggtcaacattaacaaacagaagaaagatgcattccagattcttaaacctgaa
ttggatgtggatcctgaaaagaatcctcattttgatccggatgtgggcatcagtaaaaaa
tttttgaggccaaagaggatgggtttcgcgtttgtagaggaaggaaaatggacaagagat
gctgagcttataaaattaaagactaaatttggagaagcacaagccaaagagcaaagagca
aagcagcaacagtttgcaaaggcaaaggcagcgccagatattaatccaaatttgatagaa
gtaggagagagagttatcaccaaagaaaaaccaaaggatccaattcctgaaatcgagtgg
tgggatgtgccactgttgcactctggtacttataaggaagttgttgatggtacagtagct
gaagataaattaaagatagagaaaatcacaatctatattgaacatcctcaacctattgag
ccccctactgagccagctcctccaccgcctcaaccactgaagctgaccaagaaggagcag
aaaaaactacgtacacagaaacgtctggccagagagaaagataggcaggagatgattaga
caaggcctgcttgagcccccaaagccaaaagttaaaatgagtaatttgatgaaagttctt
ggctctgaagcaacccaagatccaaccaggcttgaaaaggagatcaggagtgcagctgct
gaacgtgaacaagctcatgtagacaggaatatagcacggaagctcactcctgccgagcgt
cgtgagaagaaagaaaggaagctttttgatgaccctaataacgtggagacaatcgtctca
gtttacaggatcaatgagctgtcacatccaaaggcccgcttcaagatagatgttaatgcg
cgagagaaccggctgactggatcttgtgtgatatcagatggtattaatgttgtggttgtt
gaaggtggaagcaagtctatcaagaggtatgcaaaggttatgcttaggcgcataaactgg
gctgaggcagtaaaagaagaggaagaagatgatgatgctgacgatgacaagcctcccaac
aagtgcgtgttagtatggcaaggaagtgttgcaagacggagcttcaataggttttctgtt
catgaatgcatgactgaagccgctgcccggaaggtttttgccgatgctggcgttgctcat
tactgggatcttgcggtcaactttcaagatgataattag

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