Malus sylvestris (European crab apple): 126629785
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Entry
126629785 CDS
T09027
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126629785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126629785
03012 Translation factors [BR:
msyl03012
]
126629785
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126629785
Translation factors [BR:
msyl03012
]
Eukaryotic type
Release factors
126629785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
126629785
NCBI-ProteinID:
XP_050155876
LinkDB
All DBs
Position
7:complement(2960843..2992231)
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AA seq
449 aa
AA seq
DB search
MADAHETPDKNIELWRIKKLIKGLEAARGNGTSMISLIIPPRDKIPRVTKMLSDELGSAS
NIKSRVNRQSVQGAITSAQQRLKLYNKVPPNGLALFTGTIATEDGNEKKVTFDFEPLKPI
NVSLYLCDNKFHTEALNELLECGEKFGFIIMDGKGTLFGTLSGNVREVLQKYRIDLPKKH
GRGGQSALRFARLGEEARDNHVIKTAELAKSLFINPATNQPNVKGLILAGSADFKTKLSE
SGKFDPRLQAKILKVVDISYGGEDGFNQAIKLSAEFLSNVKFIQEQILLEKYFKEVNEDT
GKYVVGVEDTLKALEMGAIKTLIVWENLEIDRYVLKNSKTDEIVVKHFDKEQEKNMSNFQ
DPPSQGELKIQEKMSLLEWFADEYKRFGCALEFVTNKSQEGSQFCRGFGGIGGLLRYQLD
IRSFDEFGDDEVDEDGEVYDVEEAAYDSE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgctcatgagactcctgataagaacattgagctatggagaattaagaaactg
atcaagggacttgaagctgcaaggggcaatggcaccagtatgatttctctcatcattcct
ccccgtgataaaatacctcgagttacgaagatgcttagcgatgaattaggatcagcttcg
aatatcaaaagtagggtgaatcgtcagtctgttcaaggtgcaattacatccgctcagcag
cggctcaagctctataacaaggttcctccaaatggccttgctctgtttacaggaactatt
gctaccgaagatggcaatgaaaagaaggtcacgtttgattttgagcctttgaagccgatc
aatgtgtctctttacctctgtgacaacaagtttcataccgaagctctgaatgaactctta
gaatgtggtgaaaaatttggtttcattatcatggatggtaaggggactcttttcgggaca
ttgagtggtaacgtaagggaggttcttcagaagtatcgcattgacctgccaaagaaacac
ggaagaggtgggcaatcagctcttcgatttgctcgccttggagaggaagcacgcgacaac
catgttatcaagacagcagagcttgccaaaagtttgtttattaatccagccactaaccag
cccaatgttaaaggattaatactggctggatcagctgatttcaaaactaagcttagtgag
tcgggtaagtttgatccccgtctgcaggcgaaaatactgaaagtggtggatatttcttat
ggaggagaggatggattcaatcaggctattaagttgtcggccgaatttctgtccaatgtg
aaatttatacaggagcagatcttattagaaaaatactttaaagaggttaatgaggataca
ggaaagtatgttgttggcgtagaggacacgctaaaggctttggagatgggagcaattaag
acacttattgtgtgggaaaatctggagatcgataggtatgtgttaaagaattcaaagact
gatgagattgttgtgaaacatttcgacaaggagcaggaaaaaaatatgagcaactttcaa
gatcctcccagccaaggagagctaaagattcaggagaagatgtcactgttggaatggttt
gctgatgagtacaagcgttttggttgtgctcttgagtttgtcaccaacaaatcacaagag
gggtcacaattctgtcgaggttttgggggtattggagggcttctccgctaccagcttgat
ataaggtcgttcgacgagtttggtgatgatgaagttgatgaggatggagaagtttacgat
gttgaagaggctgcttatgattcagaatag
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