Malus sylvestris (European crab apple): 126629974
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Entry
126629974 CDS
T09027
Name
(RefSeq) U-box domain-containing protein 14-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126629974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126629974
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126629974
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
U-box type E3
126629974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
MCAfunc
ARMC9_ARM
KAP
zf-Nse
zf-C3HC4_4
ARM_LIN_C
Arm_2
zf-C3HC4_2
MLKL_N
HEAT_EZ
zf-C3HC4
DUF6746
zf-RING_2
LinB-like_C
Herpes_UL36
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
126629974
NCBI-ProteinID:
XP_050156104
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Position
1:complement(19312680..19316239)
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AA seq
622 aa
AA seq
DB search
MVPSNSVLSQLAESVKAISELPECRNAFRKMYGNFVRRVKLLSPLFEELRDSDKALGEEE
VVALESLGEALNSAEELIKSVNQGSKLYQALQRDEIVDKFHQMTVKIEAALSKIPYEKFD
MSEEVSEQIELVHAQFKRAKEKKDCLDSQLEMDLAIAVRDKDLDPAVIKRLSERLYLRTI
NDLKKESLAFHELVIASDRDIGDHFENMQSLLKKLKDLVLKENPEVKNSEHDKSTIKHRS
PVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTAITPNY
VLKSLIALWCESNGVELPKNKNRKAGSSISDCDRTSIASLLERLAKGNSEEQRAAAGELR
LLAKRNADNRVCIAEAGAIPLLVELLSSADPRTQEHAVTALLNLSINDSNKVGIVNAGAI
PDIVDVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGALPALIKLLCEGTPRGKKDAA
TAIFNLSIYQGNKARAVRAGIVPPLMRLLKDAGSGMADEALAILAILASHQEGKAAIAQA
EPIPVLVEVIRTGFPRNRENAAAVLWSLCTGDLQQLKLARELGAEEAMKELSENGTERAK
RKAVSVLEFLQRVEDDFVPQQS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggttccgagcaattcagtactgagtcaacttgccgagtcggtgaaggcgatttccgag
ttgcccgagtgccgaaacgcgttcaggaagatgtacgggaacttcgtgcggagagtcaag
cttttgagtcctctgttcgaggagttgagggacagcgataaagcgctgggggaagaagaa
gttgtagctttggagtcgctgggggaggctttgaattcggctgaggagctcatcaagtcg
gtcaaccaagggagcaaactttatcaggctttgcaaagggacgagattgttgataagttt
caccaaatgacggttaaaattgaagcagcattgagtaaaattccttatgagaaatttgac
atgtcagaggaagtttccgaacagattgaactagtgcatgctcaattcaaaagagcgaaa
gaaaaaaaggactgccttgactcgcaactggagatggatttagccatagcagtaagagac
aaagatcttgaccctgcagtaataaaaagactttcagagaggctgtacctcagaaccatc
aacgatctaaagaaagagtcacttgcttttcatgaattggttatcgcaagtgacagagat
ataggggaccactttgaaaacatgcaatctctgcttaagaagctaaaggacttggtgctt
aaagaaaacccagaagtcaagaactctgaacatgacaagagcacgatcaaacacagatct
cctgtcatcccagatgattttcggtgtccaatatcattagaattgatgaaggatcctgtg
attgtctctactggacagacatacgaaagatcctgtattcagaagtggttggatgctgga
cacaaaacctgtcccaaaacacagcagacattgttgcacacggccataacaccaaactat
gttttgaagagtctaattgctttgtggtgtgaaagcaatggcgttgagctacccaaaaat
aaaaacagaaaagcaggaagcagtatttcagactgtgatcgcacttctattgcttccttg
ttagaaaggctagcaaagggaaactcagaagaacaaagagcagctgctggtgagctccgc
ttgctggcaaagaggaatgcagataatagagtgtgtattgctgaggcaggagccattcct
ctccttgttgagctcttatcatccgctgatcctcggacccaagagcatgctgttacagca
cttctcaacctctcgataaatgacagcaacaaggtaggaattgtaaatgcaggagctata
cccgatatagtagatgttttgaaaaatggcagcatggaggctagagaaaatgcagctgca
acccttttcagtttgtctgttatagacgaaaacaaggtggcaattggagctgctggggct
ctcccagcccttataaaattgctgtgcgaggggactccgagggggaaaaaggatgctgcc
accgctatttttaatctttcgatctatcagggaaataaggccagggctgtaagggcaggc
attgtccccccactgatgagattgctcaaggatgcgggaagtgggatggcggatgaagca
ctagcgatcctggccattctggctagccaccaagaagggaaggcagcaattgcccaagct
gagccaatcccagttttggtggaagttataagaactggtttcccacgcaaccgggagaat
gctgctgctgtgttatggtcgttatgcacaggcgatttgcagcagttgaaactagcaagg
gaactcggcgcagaagaggcaatgaaggaactgtcggaaaatggcactgaaagggccaag
agaaaagctgtaagtgttttggagttccttcaacgagtcgaagatgattttgttccccaa
caatcctag
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