KEGG   Malus sylvestris (European crab apple): 126629990
Entry
126629990         CDS       T09027                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04144  Endocytosis
msyl04145  Phagocytosis
msyl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126629990
   04145 Phagocytosis
    126629990
   04148 Efferocytosis
    126629990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126629990
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126629990
   04031 GTP-binding proteins [BR:msyl04031]
    126629990
Membrane trafficking [BR:msyl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    126629990
 Endosome - Lysosome transport
    126629990
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126629990
  Exosomal proteins of other body fluids (saliva and urine)
   126629990
  Exosomal proteins of colorectal cancer cells
   126629990
  Exosomal proteins of bladder cancer cells
   126629990
GTP-binding proteins [BR:msyl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    126629990
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 126629990
NCBI-ProteinID: XP_050156125
LinkDB
Position
1:complement(19327566..19330945)
AA seq 199 aa
MGCSASLPDRSSGLLAGPNSENGGASDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPDS
FNKAQYWVKELQKHGSPDIVLALVGNKADLHEKREVPVQEGIEYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPAP
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcagcctcccttccagataggagttctgggctgttggccgggccaaattcc
gaaaacggtggagcttctgatgccaaaaatctgcgcgtaaagctagtattgttgggcgat
tctggagttggtaaaagttgtattgttctgcgttttgttcgtggtcagtttgaccccaca
tccaaggtgactgttggagcttcattcttgtcacagacgatagctttgcaagattctaca
acagttaaatttgaaatatgggacactgcaggacaagagaggtatgctgcattggcccca
ctttattatcgtggtgctgcagttgcagttgttgtgtatgatataacaagtcctgattct
ttcaacaaagcgcagtattgggttaaggagctacagaaacatgggagccctgatatcgtc
ttggccttagtcggtaacaaagctgatcttcatgagaaacgtgaagttcctgttcaagag
ggaattgaatacgctgaaaagaatggaatgttctttatcgagacatctgcaaagacagca
gataatattaatcagctgtttgaggaaattgccaagcgactaccccgtccagccccttga

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