Malus sylvestris (European crab apple): 126630376
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Entry
126630376 CDS
T09027
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
126630376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126630376
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
126630376
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
DYH2-5-8_CC
Motif
Other DBs
NCBI-GeneID:
126630376
NCBI-ProteinID:
XP_050156450
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All DBs
Position
7:complement(21887400..21890073)
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AA seq
645 aa
AA seq
DB search
MEEEEGGKVRVLIETATISTEPDVDPRLLKAIKSVVRYSDSELRLAARILMDLMKREHSQ
VRYLTLLIIDELFMRSKLFRTLVVENLDQLLTLSVGFRIHLSLPPPANVATALRKKAIEF
LEKWNSSFGVHYKQIRLGFDYLKNTLKYQFPNLQETATRLQQERRERERKTRKILLKKFE
ILEKNFVSIKEEIQSTVDEIGECLEIVRPKEEGVPFCPLDEEDIEEFHSYEFRQLRLQAL
EEGEKLHENSENKVVFDALRELYKILVKHLTAVQEWILVLVKVELTDNRSRDSYLKEFID
IRNNIQSVKKKCEESGCNLSNIAKHEEEDFWEEGKIETTEGGNFNLPNNRTGGLAVASTS
KEVQGSIPKRHDKESDANKRLSHEGGGSNSDPLRSKLLAEAPEVTWSNHLASWGSKMDVL
ANHRGLELESHWGRVDQDAVIPAEKIAELNLQATVYKEKQVEIQPCRAPLSNGKLCPRRD
LRICPFHGPVIPRDDEGKPLNQNPPKDEKAPDLGTNLVEQLTKQAVHNVREKDKELARKR
EIDKKALKRAKLAKIREHNEAVLRDSAIASTSKSAFIGEDWEPSTSRNPSFRNKKKTLAS
MLQKKETPKDRLARRILNTRASAATVRQLTLGEDANYREAFPNQW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaaggagggaaggttagggttttgatagagacggcgacgatctcgacc
gaaccggatgtcgacccacgcctcctcaaggccatcaagtcggttgtccgatactccgat
tcggagctccgactcgccgctcgtattctcatggatcttatgaagcgcgaacactctcag
gtgcgctacctcacacttcttatcattgatgagctttttatgagatcaaagctatttaga
acccttgttgtggaaaatttggatcagttattgactttaagtgttggatttagaatacat
ttgtcactcccacctccggcaaatgttgcaactgctctgcgtaagaaggcaatagagttt
ttggagaagtggaattcttcgtttggggttcactataagcagattaggttagggtttgat
taccttaagaacacccttaagtatcagttcccgaatctacaagaaactgcgactcggctt
cagcaggagagaagggaaagggagaggaagacaagaaagatcttgttgaaaaagtttgag
attttggaaaagaattttgtgtcaattaaggaagaaattcaatctactgttgatgagatt
ggggagtgtttagaaattgtacgccctaaagaggaaggtgtgccgttttgtccattagat
gaggaagatatcgaagagtttcattcttatgagttccggcagttgcgcttacaagcattg
gaagaaggagaaaagcttcatgagaatagtgaaaacaaagtggtttttgatgccctgcgg
gagctttacaagatattggtaaagcatttgactgcagtgcaagaatggatccttgttctt
gtaaaagttgaactgactgataacagatccagggattcatatttgaaggagttcatcgat
atccggaataatattcaatcagtcaagaagaagtgtgaagaatcgggatgcaatctttca
aacattgcaaagcatgaggaagaagatttttgggaggaaggcaagatcgaaacaactgag
ggtgggaattttaatcttcccaataacagaactggaggtcttgctgtggcatcaacatcc
aaggaggtgcaaggtagcattcctaaacgccatgataaggagagcgatgccaataagagg
ctcagtcatgaaggtgggggaagcaattcagaccctctgagaagtaagcttctggctgaa
gctcctgaggtgacctggagcaatcatttggccagttggggttcaaagatggatgtattg
gctaaccatcgggggttggagcttgaaagtcattggggcagggtggatcaggatgcagtt
attccagcagaaaagattgcggaattaaatcttcaggctactgtgtacaaagaaaagcag
gttgaaattcagccatgccgagcaccattaagcaatggaaaactttgtccgagaagagac
ttgagaatttgcccatttcatggacctgttattcccagagatgatgagggaaagccactg
aatcagaaccctccaaaagatgagaaagctcctgatttagggaccaatttagtagagcag
ttaacgaaacaagccgtgcataatgttcgtgagaaagataaagagttggcaaggaagaga
gaaatagataaaaaggcactgaagcgtgccaagcttgccaaaataagagaacacaatgaa
gcggttttacgggattctgcaatcgcttcaacttctaaatctgcatttattggagaagat
tgggagccaagtactagtaggaacccgtcattcagaaacaaaaagaaaacccttgcctcc
atgctgcagaagaaagagacaccaaaagatagattagctcggaggattttgaatacacga
gcaagtgctgcaactgtaagacaacttacattgggcgaggatgcaaattaccgagaagcc
ttcccgaatcagtggtaa
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