Malus sylvestris (European crab apple): 126630481
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Entry
126630481 CDS
T09027
Name
(RefSeq) protein transport protein SEC23-like isoform X1
KO
K14006
protein transport protein SEC23
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126630481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126630481
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126630481
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
126630481
NCBI-ProteinID:
XP_050156557
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Position
7:8233894..8243458
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AA seq
761 aa
AA seq
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MSEFMDLESQDGVRMPWNVIPGTKQESTNSVVPVSAIYTPIKPFPSMPVLPYAPLRCRTC
RSVLNPFSTVDYAAKIWICPFCFTRNHFPPHYASISDENLPAELFPQYTTIEYDSSIEKP
TSPPVFIFVVDTCMIEEELSFLKSALSQALGLLPDHSLVGLITFGTFVHVHELGFPNVPK
TYIFKGSKDVNKEQLLEQMSFFLKKPKPATGVIAGPRDGLSTESIARFLLPASDCEFALN
SVLEELQKDPWPVPADQRATRCTSTALSVAASLLGACVPGSGARIMAFIGGPSTEGQGAI
VSKNLSEPIRSHKDLDKDSAPHFHKAVKFYEGLSKQLVNQGHVLDLFACALDQVGIAELK
IAVERTGGLVVLAESFGHSVFKDSLRRVFQSGDYELGLSSNGIFEINFSKDVKVQGIIGP
CASLEKKGPLCSDAVVGQGSTSAWKMCGLDKATSLCLIFEIVKKEIPDATVQPTSNQFYF
QFLTYYQHSSGQMRLRVTTLSRRWVAGPGSLQELIAGFDQEAAAVVMARLVSFKMESEAE
FDPIRWLDKSLIHMCSRFGDYQKDSPSSFSLSPRFSIFPQFMFHLRRSQFVQVFNNSPDE
TAYFRMILNRENVTNSVVMIQPSLISYSFHSGPEPALLDVAAIAADRILLLDAYFTVVIF
HGSTIAQWRKAGYQDLPEHQAFAQLLQAPRDDGDQISKERFPVPRLVICDQHGSQARFLL
AKLNPSATYNNEAPLPGGDVIFTDDVSFEVFLDHLQRLAVQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatttatggacctggaatcccaagacggggttcgaatgccatggaacgtaatc
ccaggcacgaagcaagagtccaccaacagcgtagtcccagtctccgccatctacactccg
atcaagccattcccctccatgcccgtcctcccctacgcccccctccgctgccgcacctgc
cgctccgtccttaacccattctccaccgtcgattacgccgccaagatctggatctgccct
ttctgcttcacccgcaaccacttccctccccactacgcctccatctccgacgagaacctc
cctgccgagctcttcccccagtacaccaccatcgagtacgactcctccatcgaaaaaccc
acctcgcctccggtctttattttcgtcgtcgacacctgcatgatcgaggaggagctctcg
tttctcaagtccgctctgtctcaggctctcggtctcctcccggaccactctctcgtgggg
ctcatcactttcgggaccttcgtccatgtccacgaattgggtttccccaatgtccccaaa
acttacattttcaaaggatccaaggacgtcaacaaggagcaattgcttgaacagatgagt
ttctttctcaagaagccgaagccggctactggggttattgcgggcccccgtgacgggttg
agcaccgagagcattgccagatttttgttgcccgcatcagattgtgagtttgcgcttaat
tcagtgttggaggagttgcagaaggacccttggccggtgcccgcggatcagagggccacc
cggtgcaccagcaccgcgcttagcgttgctgccagcttgttgggagcttgcgtgccaggt
tctggagctcggatcatggcattcattggtgggccgtctacagaaggccagggtgctatt
gtatcgaaaaacttatctgagcctattcgttctcacaaggacctggataaggattctgct
ccacacttccataaagccgtgaagttctatgaaggactatcaaagcagcttgttaaccaa
ggacatgttcttgatctttttgcttgtgcccttgaccaggtggggatcgcagaacttaaa
attgctgttgagagaactggaggactagttgtgcttgctgaaagttttggccattcggtg
tttaaggactcactcagacgcgtttttcagtcgggtgattatgagcttggtttgtcatca
aatggtatatttgagataaacttctcaaaagatgtcaaagttcagggcattattggtcct
tgtgcatcgcttgagaagaaaggtcctctgtgctcggacgcggttgttggtcaggggagc
actagtgcatggaagatgtgtggccttgacaaagcgacatctttatgtctaatatttgaa
attgttaagaaggaaatcccagatgctactgttcaacccactagcaatcaattttacttc
cagtttctcacttattatcagcatagtagtggtcaaatgagacttcgtgttacaacccta
tcgagaagatgggttgctggacctggaagccttcaggagttgattgctgggtttgaccaa
gaagcagctgctgtagtcatggcacgcctagtttccttcaaaatggaaagtgaggcagag
tttgaccctataagatggttggataaatcactgatacacatgtgttctcggtttggagat
taccaaaaggacagtccctcttctttcagcttatctccacggttttcaatcttccctcaa
tttatgtttcatttacgacgttctcaatttgtccaggtttttaacaacagcccagatgaa
acagcgtacttcagaatgatcctaaaccgagaaaatgttaccaattcagttgtgatgatt
cagccttcgttgatttcatattcatttcattcaggcccagaaccagcacttcttgatgtc
gctgccatcgcagcagacaggattctgcttttagacgcctactttactgttgttattttt
catggttcaactattgcacaatggcggaaagcagggtatcaggacctgccagaacatcag
gcatttgctcaattgttacaagctcctcgtgacgatggagatcaaattagcaaggaaaga
tttccagtaccccgcctggtgatttgcgatcagcatggttctcaggcccgttttcttttg
gcaaagttgaatccttctgctacctacaacaacgaagctccacttccgggaggggatgtg
atctttactgacgatgtcagttttgaggtcttcttggatcatctccagagattagcagtt
caataa
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