Malus sylvestris (European crab apple): 126630622
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Entry
126630622 CDS
T09027
Name
(RefSeq) uncharacterized protein At3g06530 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126630622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126630622
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126630622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
126630622
NCBI-ProteinID:
XP_050156723
LinkDB
All DBs
Position
7:31057442..31071816
Genome browser
AA seq
2150 aa
AA seq
DB search
MATSIAAQLEAIKSVIQADTEPSGSSKRPFTRPSILFDAKEAADIDVHTIFSIALQGLEV
LVSVDERFRIYKNDLFSQKSKDLDRELMGIEDNNRINASISSYLRLLSGHFELSSSIKTL
EYLIRRYKIHVYNFEELILCGLPYHDTHIFVRIVQLINLRNSKWKFLDGVKASGAPPPRN
VIVQQCIRDKGVLEILCNYASPSKKYRPSRTVIKFCMAVVIEVLGSATSVDSDVVKRILP
LVASGLESGTKGHPENKAGAMMIVGLLASKVTLSPKLVKSLIRSIAEIAREEAKESADLQ
LFRLSLMTLINLVQFQAVDMFPIKTMEIFMDIRDIAGILLGLFNEFNIDRFILVLLDSLV
DYSSSNESCQLALISVLETIPSKSFVQHVVAKVLSSCLQSSQKITNSTSSISGSWAKKIL
IVLSKKYPSELQGAVQKFLDEKNVQTKKGGSVYETLGKMLDGNLDTSLAFSESKIWFGLH
HPKADVRRRVLSALGTSVVLEAKATNPQSFVTIQDAILRQLHDDDLTVVRAALSVDKLST
IINSSDLVEALDDVLKRCFSILMSSSLENTSLACDVAVLCLNNASSDIHDNVDRCNILAA
MIFPLLLVLPKTQRLNLKALELAKEVKWPLFENLAAPASSTAFASQPGRLSSINMDTITG
LASRFLLHPEEFMPWLVNSANAFESSRTLFFLVMMQTLVIQKNESAEALALFEIGFPALK
TEWEAFESVGDSSIEEFDTEMLNWDCRTFLDKLDSNLKSLNANILICLVWKLMKAFLSVM
PATVSVDDDKKWVSWLRDLFVFFSVSKFKKVFKEHRHYLVTKCKVSAVCFLPKFFTEEDV
PVAVQVESLNCFTYLCRQPEVRLPIQLLAEFPSVLVPLDSYNQDIRNAAMSCIEGLLTLW
AHVDSSSKKNGNHATWIHFLGKLLDLVVQQKRLILSDKNFLLSLLASSLSPSYESFMAPK
NIELRIFCRVDQSTREKILAFILNSALKLPDYAKLSILSLLKGMGNAILHDREMKSFLSL
LLERRSQDCVSSHGLSNTEVQILCHLLESCAMPSPSDKHVSEDHLLEALKLDGLAPEDPA
VIQPCLTVLQKLNGQIYSGLETEIQDLLFRRLLSLFRNANGDIQNETRAALLRLNITCST
IIRTLDYIVKDRTGSVHGKKKMKLVGHPKSSQSHDLSCNGENAPSLLGSLLEVLLFQKDI
ENRDSLLGSLFKLLSKTFSDEWVQSVLDQDEKCIQVTSSNSDSLSSTISSIQQTLLIILE
DICSSLTHSVSLGDDILHEIDVKMLVECAHSAKDGVTRNHVFSLISSITKIIPEKVLEHI
LDIFTVIGEAAVTQIDSHSQRVFEDLISTVVPCWLSGTGNNDKLLQIFINILPEVAEHRR
LSIIVYLLRTLGEANSLASLLALLFRSLVTRKGLFYFESTHTSDSSTASLQREWEYSLGL
QICEQYSCMIWLPPLVLMLKQIGAGIQSQELFIELLIAMRFTLNKLQDPEFAFKLASRED
SEKIQATLEELMEQVVSIQQLVDATRKKRSIHVSVRKELKECMHAVLRTITVVMMPQTHF
SGITKLLGHRDRNVAKKALGLLCETVREHDMVRPKQKHKSISSDWWQHLDENSLESFHSM
CLKIVQLVDDSSDDMEVSLKVAAALALEVLAHRFSSNHSIFIECLPYVTKNISMHDLAVS
SSCLQATGALINVLGHRALSELPHVMENLIRISRKIFLSSDMKTISGVDGTDIALQIPKE
SLILSILVSLEAVVVKLGGFLNPYLEEITRIMVLDLDYASGSDPKLKMKADSVRRLITEN
IPVRLALPPLLKIYSSTVESGDSSLAVYFGMLENMIGRMDRSSVSGYHAKIFDLCLLALD
LRRQHPASVQKIDDVEKIVFNAMIALTMKLTESLFKPLFIRSIDWAESDVEDIASTGNIP
RAISFYGLVNKLAENHRSLFVPYFKYLVDGCVRYLTVAGDVNTSGSTRKKKAKIQEGKDN
SILLGNWHLRALVLSSLHKCFLHDTGSLKFLDSSNFQVLLKPIVSQLVAEPPSSLEEHPD
IPSVEEVDNLLVVCIGQMAVTAGSDLLWKPLNYEVLMQTRSDKVRTRILGLRIVKYLLEH
LREEYLVFLPETIPILGELLEDVELPVKSLAQSILKDMETMSGESLREYL
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgattgctgctcagctagaagccataaaatccgtgatacaagccgacacg
gagccgtcggggtccagcaagaggccgttcacccgcccttccattctcttcgacgccaaa
gaggccgccgatatcgatgtccacaccattttctccatagcactccaaggtctggaggtc
cttgtaagcgttgatgagcggtttagaatctataagaatgacttgttcagccaaaaaagc
aaagatttggatagagagttgatgggcattgaggacaataatcggattaatgcttcgatt
agttcgtacttacggttactctcaggacactttgagctgtcatcatcaatcaagacactt
gagtacttgatacgcagatacaagattcatgtctacaactttgaggaattaattttgtgt
ggtttgccataccatgacacccacatttttgttcgaatagttcagttgattaacttgaga
aatagtaaatggaaatttctggacggcgtaaaagcttctggtgcaccaccacctagaaac
gttatagtccagcaatgtatccgtgataagggggttttggagattttatgcaactatgca
tccccatcaaagaagtatcgcccgtcaaggaccgtgataaaattttgcatggcagttgtt
atcgaggttttgggttctgctacatctgttgacagtgatgttgtgaagagaatcctaccg
ctcgttgcttctggacttgagtcaggcacaaaagggcatccagaaaacaaggccggagcc
atgatgattgttggtttgctagcaagtaaagttacattatctcccaagcttgtgaagagt
ttgattaggtcaattgctgaaattgctcgagaggaggcgaaagagtcggctgatcttcag
ttgtttcgcttatcacttatgactttgatcaaccttgttcagtttcaagctgtggatatg
tttccaatcaagactatggagatttttatggacattagggatatcgctggaatacttttg
ggactgtttaacgagttcaatattgatagattcattttggtgcttttggattctctggtt
gattacagttcgtctaatgaatcatgccagcttgccttgatctcggtattagagacaatt
ccttccaagagttttgttcaacatgtagttgctaaggtcttatcatcctgcttgcaaagt
tcacagaaaataacaaattcaacatcatcaatatcaggaagctgggcaaagaaaatctta
attgttcttagcaagaaatatccatctgaactacagggagcagttcagaaatttcttgat
gaaaagaatgtgcaaactaagaaagggggctcagtatatgaaactttgggtaaaatgttg
gatggtaacttggacacgtcactggctttttcggaatcaaaaatttggtttgggttgcac
catccaaaggctgatgttcgtcgccgtgtactgtctgcattgggcacatcagttgtcctg
gaagccaaggctactaatccacagagttttgtaaccatccaagatgccatattgcgacag
cttcacgatgatgatcttactgttgtgcgggcagctctgtctgtagacaaattgtccact
ataataaattcttccgatcttgttgaagcactggatgatgttcttaaaagatgttttagt
attctgatgtcaagttcgttggagaacaccagtctagcttgtgatgttgctgttttgtgc
ctgaataacgctagctctgatatccatgataatgttgaccgttgcaatatacttgctgcc
atgatatttcctctactccttgttctgcctaagacacagaggttaaatttgaaagctttg
gaattagctaaggaggtaaaatggccactttttgagaatcttgctgcgccagcttccagt
acagcatttgcatcacaaccgggaaggctgtcctcaattaacatggacaccattactggt
ctggccagcaggttcttgttgcaccctgaagaatttatgccgtggcttgttaatagtgct
aatgcctttgagtcgtcaaggacactttttttcttggtgatgatgcagacacttgttatt
cagaagaacgaatctgctgaagcattggcccttttcgaaattgggtttcctgcactaaag
accgaatgggaagcatttgagtctgtaggtgatagctctatagaagagttcgatacagag
atgctaaattgggattgcagaacgttccttgataagcttgattccaatttgaaatcatta
aatgcaaatattctcatatgcctagtttggaagttaatgaaggcatttttgtctgtgatg
cctgcaactgtctctgtggatgatgataagaagtgggttagctggcttagggacttgttt
gtctttttttcagtttctaaatttaagaaagttttcaaagaacaccgtcattaccttgtc
acaaagtgcaaggtctctgctgtttgctttttgcccaagtttttcacagaagaagatgtt
ccagttgcagtccaagttgagagtcttaattgttttacttatctctgtcgtcaaccagaa
gttagattgccaatccaacttcttgcggaatttccatctgttcttgttccattggatagt
tacaatcaggatataagaaatgctgccatgagctgtattgaggggttactcacactttgg
gctcatgttgactcttcgagcaagaaaaatggaaaccatgcaacttggatacattttctt
ggtaagcttttggacttggtggttcagcaaaaaagactcatcttatcagacaaaaacttt
cttctttcccttttggcctcttcgctcagcccatcctacgagagcttcatggcaccaaag
aatattgagctaagaattttttgtagggttgatcaatctacaagagagaagattcttgct
ttcattttaaattccgccctgaaactgcctgattatgcaaagctttcaattttatctttg
cttaaaggaatgggcaatgccattttacatgatagagagatgaagtcatttttatcactg
cttttggagagacgcagtcaagattgtgtctctagccatggtttgtcaaacactgaagtt
cagatactatgccatctactggagagttgtgctatgccttctccatcagataagcatgtt
tcagaggatcatttgttggaggctttgaagttggatggtttggctccagaagaccctgct
gttatacagccttgtctaactgttctgcagaagcttaacggtcaaatatacagtgggcta
gagacagaaatacaggaccttctgtttcgaagacttctttctttatttcggaatgctaat
ggtgatatacaaaacgaaactagagcagcgctgctgcggttaaatattacctgctctact
atcattcggacacttgattacatagttaaagacagaactggttcagtgcatggaaagaag
aaaatgaaattggtaggtcatccgaagtccagccagtcccatgatttgtcatgtaatgga
gaaaatgcaccctctctccttggatccctccttgaagttctactatttcagaaagacata
gagaacagggattctcttttggggtcactatttaaacttctttccaaaacattttccgat
gagtgggtacagagtgttcttgaccaggatgaaaagtgtattcaagtcacttctagcaat
tctgactctttgtcaagcacaataagttccatacaacagacattgctgataatcctagaa
gatatttgttcttctctaacacattcagtttcactgggggatgacatattacatgagatt
gatgtcaaaatgttggttgagtgcgcccattctgcaaaagatggagttactcgaaaccat
gtattttcactgatttcctctatcacaaagattattccggaaaaagttttggagcatata
ctggatatttttactgttattggtgaagcagcagtcacacagattgacagccattcacag
cgtgtgtttgaggatcttatatctacagttgttccatgctggttatctgggacaggcaac
aatgacaaattgctccagatttttatcaatatattgccggaagttgccgagcatagaagg
ctgtcaatcattgtatacctactgaggaccttgggagaggcaaatagtttggcttcatta
cttgcccttctcttccgttcattggttacacgaaaaggattattttactttgagagcacg
catacttcagatagctccacagcctcattacagagagagtgggaatattctctgggtctt
caaatatgtgagcaatattcatgcatgatatggcttcctcctttggttttgatgcttaaa
caaataggagctggtattcagtctcaagaactgtttatcgaattgttaattgctatgcga
ttcaccttaaacaaattgcaagatccagaatttgccttcaagcttgcatcaagggaagat
tcagaaaaaattcaggctacgctggaagagcttatggagcaggttgtctctatccagcaa
cttgtggatgcaacaaggaagaaaaggagtatccatgtttctgttaggaaagagttgaag
gagtgcatgcatgctgtattaaggactattacagtggtcatgatgccccagacacacttc
agtggtatcactaagttgcttggccatagagatagaaatgtggcaaagaaggcacttgga
ctcttgtgtgaaacagttagggagcatgacatggtccgaccaaagcaaaaacataaatcc
atttccagcgattggtggcagcatctagacgagaattctcttgaatcgtttcacagtatg
tgtttgaaaattgttcagttagttgatgattcatcagatgatatggaagtctctttgaag
gtggcagcggctttggctctagaagttctggcccataggttttcttctaatcattccatc
ttcattgagtgtctaccatatgttacaaaaaatatcagtatgcacgacttggcagtgtcc
tctagctgccttcaagcaactggtgctttgattaatgtgctcgggcacagggcactatct
gagcttcctcacgtaatggaaaacttgattaggatttctcgcaaaatatttttatcttca
gatatgaaaaccatatctggtgtggatggcacggatattgcgttacaaataccaaaggaa
tctcttattttatctattctagtcagtttggaggctgttgtagttaagctaggaggtttc
ttgaacccctatcttgaagaaattacaagaattatggtgcttgatcttgattatgcgtca
gggtctgatccgaagctgaaaatgaaagctgactcagtacgaaggctcatcactgagaat
atccctgttcgacttgccctaccgcccttgctgaaaatatactctagtacggttgagtct
ggtgattcgagcttagcagtttattttggaatgctggaaaacatgattggtagaatggat
agatcatctgttagtggttaccatgctaagatttttgacctctgcttgcttgctcttgat
ctacgtcgccaacatcctgcatctgttcagaaaattgatgatgtagagaagattgtgttc
aatgcaatgattgctctcaccatgaaactcactgagagcctgttcaagcctcttttcatt
agaagtattgattgggcggagtcagatgtggaagatattgcaagtacgggaaatataccg
agggctatatctttctatggtctggtaaataaacttgctgagaaccatcgatctcttttt
gttccttacttcaaatacttggtggatggttgtgtgcgttaccttactgttgctggagat
gtgaatacttctggttcaacacgaaaaaagaaggctaaaattcaggaagggaaggacaac
agtatattgcttggcaactggcatctcagggctttggtgttatcctctttacacaagtgt
tttctccatgatactggaagcttgaagtttttggactcttcaaattttcaggttctactg
aaacccattgtttcacagctcgtcgctgaaccaccatcgtctctagaagagcatccagac
ataccatccgtggaggaagttgataatttattggtggtttgtattggtcaaatggctgtg
actgcaggaagtgaccttttatggaagcccttgaattatgaggtgctgatgcagacacgc
agtgacaaggtacggacccgaattttgggcctgagaattgttaagtatctattggagcat
ctgagagaagaatatctggtattcctgcctgagaccattccgatcttgggagaactgctc
gaggatgtggagctccctgttaaatctcttgcgcagtcgattctcaaggatatggagacc
atgagtggtgaaagcctcagagagtacctgtga
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integrated database retrieval system
