Malus sylvestris (European crab apple): 126630624
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Entry
126630624 CDS
T09027
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126630624
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
126630624
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
EzrA
AAA_15
AAA_29
DUF3450
Sipho_Gp157
Com_YlbF
SbcC_Walker_B
AAA_21
FlaC_arch
LRAT
ABC_tran
GCP_N_terminal
DUF948
Motif
Other DBs
NCBI-GeneID:
126630624
NCBI-ProteinID:
XP_050156728
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All DBs
Position
7:31331489..31341645
Genome browser
AA seq
1051 aa
AA seq
DB search
MGDPISGLRQRSGSGIVQRVRLENFMCHSSLQIELGDWVNFITGQNGSGKSAILTALCVA
FGSRAKGTQRASTLKDFIKTGCSNAVVQVELKNQGEDAFKPEIYGDIITVERRISGTTSA
TVLKDKQGRRVASRKEDLRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKA
TLLQQVEDLLQNIEKQLEKAGVVVDELEGSIRPIERELNELQEKIKSMEHVEEISQKAKQ
LKKKLAWSWVYDVDKQLQEQNLRIVKLKDRVPRCQAKIDEKIGQVVKLRECFTLKKSEID
QMMAKTSEIRRMKDELQQTLTLATKEKIGIGEEYSRKANHIQKLMNAVRSLQQQIEDTQE
QHAKHTQAEESAIEEKLKELQNEVSTVESMLSRLKEEESALSECIQQINNEIREINQMIQ
NIDKNRREISSVIRELRQNQTNKVTAFGGQQVIYLLQSIERHHQRFTSPPIGPIGAHLTL
NNGDVWGPAVEHAIGRLLNAFIVTNHKDSLLLRACAKEAKYNNVQIIIYDFSLPRLHIPP
HMLPQTEHPTTLSRVHSENHTVLNVLVDRGDIERQVLVRDYDVGKTVAFDQRISNLKEVV
TLDGSRMFSRGSVQTVLPPNKRVRTGRLCSSYDDQISDLERQAKSVEEEDKQCMRRKRNA
EQNLQDLQEKLRNVKRRRAHADRDLASKRLALQDSAYAAEASTSPASTVDELHEEISKMQ
EEIQEKKMLLQKFRERTDEAEAKTHDLKVSYEKLCESAKGDIDAFEKAERELMETEENLA
SAEEEKAHYEGVMRNKVLRDIQEAEKEFQQLEHHREENCRKASILCPESEIIAMGDWDGS
TPEQLSALLTRLNQRLERESQRFTESIDDLRMSYKKKERKILERQKKYRAYREKLHACQK
ALNLRRSKFERNANLLKRQLTWHFNTHLGRKGMSGKIKIDDRERTLAIEVKMPQDASSST
VRDTRGLSGGERSFSTLCFTLSLHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALVQ
GSQWILITPHDISMVKNGERIKKQQMAAPRS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccctatctccggcctccgccagcgttccgggtccggcatcgtccagagagtc
agattggagaacttcatgtgccacagtagcttgcagattgagctcggcgactgggtcaat
ttcatcaccggtcaaaatggaagtggtaaaagtgcaatactgacagctctgtgtgtggcc
tttgggtctcgagctaaaggcactcaaagggcgtcgacattgaaggatttcataaaaact
ggttgcagtaatgctgttgtccaagtggaactcaaaaatcaaggggaggatgcttttaag
cctgaaatatatggggacatcataacggtagagcgcaggatttctggaaccacaagtgcc
actgttttgaaggataaacaaggaagaagggttgcttctcgaaaagaggatcttcgagag
ctagtagaacattttaatattgatgtggagaatccttgtgttgtcatgagtcaagacaaa
agcagagagtttttgcattctgggaatgacaaagataaattcaagttcttttacaaggcc
acacttcttcagcaagttgaagatcttttgcaaaacattgaaaaacagttggagaaggca
ggtgttgttgttgatgaattagagggctcaataagacctattgaaagggaacttaatgag
ttgcaagaaaagattaaaagcatggagcatgttgaagaaatatctcaaaaagcaaaacag
ttaaaaaagaagcttgcttggtcatgggtatatgatgtggacaagcaactccaggaacag
aatttgagaattgtcaagcttaaagatcgtgtgcctcgatgccaagctaaaattgatgaa
aaaataggtcaagtggtgaaactgagagaatgcttcaccttgaagaaatctgaaattgat
cagatgatggcaaagacatcagaaattaggagaatgaaggacgaattacagcagacacta
acattggccacgaaagagaagattgggattggagaagaatatagccgcaaagctaaccat
atccagaagttgatgaatgctgttaggtctcttcagcaacagattgaggatacacaggag
caacatgccaaacatacacaggcagaagaatctgcaatagaggaaaagctgaaagaactc
caaaatgaggtttctactgttgaatcaatgctttccaggttgaaggaagaggagagtgcc
ttatcagaatgcatacaacagataaataatgaaatcagagagataaatcaaatgattcaa
aatattgacaagaatcgccgagagatctcaagtgttattcgtgagcttcgtcaaaaccaa
accaacaaggtgacagcatttggtggacagcaggtgatatacctcctacaatcgattgag
agacatcatcaaagattcacaagtcctcctattggtccaattggtgcccacctgactttg
aataatggtgatgtctggggccctgctgttgaacatgccattggaaggttgctcaatgct
ttcattgtaacgaatcataaagactctcttcttctgagagcatgtgcaaaagaagcgaag
tacaacaacgttcagattatcatatatgacttttcattaccaaggttgcatatacctcct
cacatgcttccacaaacagagcacccaactactctttcccgtgttcattctgaaaatcat
actgttctaaatgttttggtagataggggagatattgaaaggcaagttcttgtacgagat
tatgacgtgggaaaaacagttgcttttgaccagaggatctcaaatttaaaggaggttgtc
actttagatggtagtaggatgttttctcgtggctctgtccagacagtactccctcccaat
aagagagttagaactggtcgtctttgtagttcttatgatgatcaaattagtgatcttgaa
aggcaagcgaaaagtgtagaagaagaagataagcagtgcatgaggagaaaaagaaatgca
gagcaaaaccttcaggatcttcaagagaagctccgaaatgtgaagaggaggcgtgcgcat
gcggaccgtgatttggcatctaagagactagcgcttcaagacagtgcgtatgctgctgaa
gctagtacatcacctgcatcaactgttgatgagcttcacgaagaaatctcaaaaatgcaa
gaggagattcaagaaaagaaaatgttgctgcaaaagtttcgagagagaactgatgaagct
gaagcaaagacacatgatcttaaagtatcatatgagaaactatgtgagtcggcaaaagga
gatattgatgcctttgagaaagcagagagagaactgatggagactgaagaaaatctggct
tctgcagaagaggagaaagctcattatgaaggtgtaatgaggaacaaggtacttcgcgat
atccaagaagcagaaaaagaatttcagcagcttgagcatcatcgtgaggagaattgtaga
aaggcttctatcctttgtcctgagagtgaaattatagctatgggtgattgggatggtagc
accccggaacagctcagtgccctattaaccaggctgaatcagaggcttgagcgagagagc
cagagattcactgaatccattgatgaccttcgaatgtcatataagaaaaaagaacgtaag
atattagagagacagaaaaagtacagagcttaccgagaaaagttacatgcatgccagaaa
gccctaaatttgcggcgtagcaagtttgaaagaaacgcaaatcttttaaagcgccagttg
acatggcattttaatacccatctgggaaggaaagggatgagtgggaaaattaagatagat
gacagggagaggacccttgctattgaggtaaagatgccccaggatgcatcaagcagcact
gttcgcgacactagagggctttcaggtggtgagcgctccttttcaacattgtgctttaca
ttgtctcttcatgaaatgacagaagccccgtttagagcaatggacgagtttgatgttttc
atggatgccgtaagccggaaaatcagcctagacactcttgtcgattttgcattggtgcaa
ggatcccaatggatactcatcacccctcacgatatcagtatggtgaagaacggggagagg
ataaagaagcagcaaatggcagctcctcgctcttga
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integrated database retrieval system
