Malus sylvestris (European crab apple): 126630627
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Entry
126630627 CDS
T09027
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126630627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126630627
Spliceosome [BR:
msyl03041
]
Complex A
Other components
Complex A specific factors
126630627
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
126630627
NCBI-ProteinID:
XP_050156733
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All DBs
Position
7:31268578..31272196
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AA seq
794 aa
AA seq
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MEAALPSNPNPPPPIESLDPHPPPSETLPSYDFNPPPPAETLASDSNGPPQPPPTETLGS
DAQNPFPNPQTTTENGISTDACKKLAITKPLLSENGLTNTNSGNERDGSGGEEETTSRRR
RRSRWDPQPESENQSGGGETGSGTRKRKSRWADEEPKAIQLPDFMGGIEFDPEIQALNSR
LLEISRMLSSGLPLDDRPEGARSPSPEPIYDNMGIRINTREFRARERLNKERQEIIAQII
KRNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRG
KGSVKEGRSQQKRDLKPDPSENEDLHVLVEADTQDALDAAAGMVEKLLQPVDEVLNEHKR
QQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPV
KGTTGKKMDDEYQNFLAELGGTVPESATKQTATLALGPGNSTSSNPPWANSTSSTSSASS
HPGLGSIGVKPVKDYDETNLYIGYLPPTLDDDGLIRLFSAFGDIVMAKVIRDRVTGASKG
YGFVKYGDVQMANNAIASMNGYRLEQRTIAVRVAGKPPQPAGPPASAMPTYPVPQPVASY
PSQQFTPSGPLGNAPPTSYAGTPVPWGPPVPPPYAPYAPPPPPPPGSTMYPPPMPGQHMS
PYGARYPPPPGAPPQPMTSNEAQQSYPPPGVQSEHNVSTQSLQTNLYGGSSAPMPPNGQH
TYPAASYGYSSYYNAVPPPPPPPGPVPGSTADQSQNIGNVPWATSAPVPPPASSAEKTTY
GADAEYEKFMAEMK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgctcttccatcaaaccctaaccctcctcctccaatcgaatccctagatcct
catccccctccttccgaaaccctaccctcctacgatttcaatccccctcctcctgccgaa
accctagcctctgattcgaatggcccgcctcaaccgccgcccactgaaaccctaggttcc
gatgctcaaaaccccttcccaaatccccagaccactactgagaatggtatttcgaccgac
gcctgcaagaagcttgctattacgaagccgctgttgtcggaaaacggcttgaccaacacc
aatagcggcaacgaaagggatggctcgggcggggaggaggagacgaccagcaggcgccgc
cgccgcagccggtgggatcctcagcccgagtcggagaatcagagtggtggtggcgagacg
ggcagtgggacgaggaagaggaagtcgcggtgggcggatgaggagccgaaggcgattcag
ctgccggatttcatgggaggtattgagtttgatccagaaattcaagctttgaatagtagg
ttgcttgagattagtcgaatgctgtcttcgggtttgcccttagatgatcgtcccgaaggg
gctaggtctccttcgccggaacctatatatgataacatgggaattaggattaatactaga
gagttccgtgcccgtgaaaggttgaacaaagagaggcaggaaattattgctcagattatt
aagaggaacccggcatttaagcccccggctgattacaggccacccaagcttcataagaag
ctttacataccgatgaaggaatatcccggatacaattttattggacttatcattgggccg
aggggtaatacgcagaagaggatggagaaagaaactggtgcaaaaattgtcattaggggt
aaaggttcggtgaaagagggcaggtcgcaacagaagagggatttgaaacctgacccttca
gagaacgaggacttgcatgttttggttgaggcagatacacaagacgctcttgatgctgcg
gctgggatggtggagaaactcttgcagcctgttgatgaggtgttgaatgagcataagagg
cagcaacttagggaacttgcggctttgaatgggacaataagggatgaggagtattgtagg
ttgtgtggtgagccggggcaccgtcagtatgcttgtccatcacgtacttcgaccttcaag
agcgatgttctttgtaagatatgtggtgatggtgggcatccaaccattgattgcccagtg
aagggtacaactgggaagaaaatggatgatgagtatcagaacttcttggctgagttgggg
gggacagttcctgaatccgcaactaagcagaccgctacattggcacttggcccaggcaac
agtacatcaagcaatcctccttgggctaacagtactagcagcactagcagtgcatcatca
catccaggcttgggatcaattggagtcaaaccggtcaaggactatgatgagacaaacttg
tacattggatacttgccgcctacccttgatgacgatggtttaatccgattgttttcagcg
tttggtgatattgtgatggccaaagttatcagggaccgggttaccggagcgagtaagggt
tatggttttgtgaagtatggagatgttcagatggctaataatgcaattgcaagcatgaat
ggttatcgcctagagcagcgaaccattgctgtcagagttgctggcaagcctccgcagcct
gctggacccccagcatcggcaatgcccacataccccgttccccagcctgttgcttcctat
ccatcccagcagtttacccccagtggtcctcttgggaatgcaccacctactagctatgcg
ggtactcctgttccttggggaccccctgttcctcctccttatgctccttatgctccgccg
cctccacctcccccgggttcaaccatgtatcctcctcccatgcctggtcaacatatgtct
ccttatggtgcacgataccctcctccccctggtgcaccacctcaaccgatgacttcaaat
gaagcacaacagagttatccccctccaggagttcaatctgaacacaatgtctctacccaa
tctctacaaactaatttgtatggtggctcctcagcaccaatgccaccaaacggccaacac
acttatcctgctgcttcatatggttactcatcttactacaatgcagttccaccacctcca
cctccccccggccctgtacctggatcaactgcagatcaatctcagaacattggtaacgtt
ccatgggccacgagtgctccggttccccctcctgcttcttctgcggaaaagacaacttat
ggtgcagatgcagagtatgagaagttcatggcagaaatgaaatga
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