Malus sylvestris (European crab apple): 126630781
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Entry
126630781 CDS
T09027
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126630781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126630781
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126630781
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
126630781
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126630781
Exosomal proteins of colorectal cancer cells
126630781
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
126630781
NCBI-ProteinID:
XP_050156936
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All DBs
Position
7:5176597..5181883
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AA seq
483 aa
AA seq
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MLKFKPNRVIIIRYNTRFQTCDYIVIIITIHDSHGRQMAGNCLQAAELTTSGRPVLLPTE
IECSLLSAVDLECEDLPNFPHLKLGLLILTTHRLLWLPDSTTTTATASSSASAIPLAAIA
HIFAAKKSIKSMFAWPRVRFQLSVSPEGRVPDSGSGSRSVVVTVVVRGKGDLDAFLSKFW
ESWRGRAWEIADEQGSSDAASGSGSASSSGLYTREGTVRMVGVSGILRKEQEMWESTDKS
LQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSTSQPNDEELGSKQEMQDWMLSVGIISP
VTKESAGAQYHQQLSRQLADFVRLPLERAGGMMNLIDIYCLFNRARGTELISPEDLLQAC
SLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFARIKTLVTKPDALRTGISASDAAITLS
IAPGMAKEHLLTAESKGLLCRDISPDGFRFYINLFPEIDPNDLYLVKDYGIYHTWLRAAS
ASG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagttcaaaccaaaccgagtcatcatcataagatacaacacacgatttcagact
tgtgattacattgtcatcatcatcacgattcacgactcacatggtcgtcaaatggccggg
aactgcctgcaagccgcggagctaaccacgagtggccgcccagtccttctcccaactgag
atcgaatgttccctcctttccgccgtagacctcgaatgcgaagacctccccaacttcccg
caccttaaattgggtctcctcattctcaccacccaccgcctcttatggcttcccgactcc
actaccacaacagccaccgcctcttcttcagcctccgccatccctctcgccgccatcgcc
catatctttgccgccaaaaagtcaatcaagtccatgttcgcctggccccgggtcagattc
cagctctcggtttcgcccgaaggccgggttccggattcgggttcgggttcgaggtcggtg
gttgtgacggtggtggtgagggggaagggcgatttggacgcgtttttgagcaaattttgg
gagagctggcggggtagagcctgggagattgcggacgagcagggcagctccgatgcggct
tcaggttcgggttcggcgtccagttccgggttgtatacgagggaagggacggtgaggatg
gttggagtttcggggatattgaggaaagagcaggaaatgtgggagagtactgataagagc
ttgcaggatgctttccaggacttgaatgctctcatgagtaaggctaaagagatggtgatg
ctagcagaaaaaatgaggcagaagcttttatctggctcgacttcgcagccaaatgatgag
gaattgggttccaaacaagagatgcaggattggatgctgagtgttggtattatatcgccc
gttactaaggagtctgctggtgctcagtatcaccaacaattgtcccgtcagttggcagat
tttgtcagacttccacttgagagagctggaggaatgatgaatcttatagacatctactgt
ctcttcaatcgtgctcgaggcacagaactgatctcaccagaggatttgctgcaagcgtgt
tcgctctgggagaaatttgatgtcccagtaatgcttcgaaagtttgatagtggagtcatg
gtcatccagaataagtcccacagtgacgaagaggttttcgctagaatcaagacccttgta
acaaagcctgatgctcttagaactgggataagtgctagtgatgctgcaattacattaagt
attgcaccaggcatggccaaggagcatcttcttactgctgaaagcaaaggtttgctgtgc
agagatataagccctgatggctttcgcttttatatcaacctgtttcccgaaatcgatcca
aatgacttgtacctagtgaaagattatggaatctatcacacatggttgagggcggcgtct
gcttctggatga
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