KEGG   Malus sylvestris (European crab apple): 126631677
Entry
126631677         CDS       T09027                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126631677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126631677
Enzymes [BR:msyl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     126631677
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     126631677
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 126631677
NCBI-ProteinID: XP_050157756
LinkDB
Position
8:complement(4315359..4322942)
AA seq 1203 aa
MGASSDAKGDIGMSSKGESFTNGVDMDIDDSDYDDEYDYSTSLQDLGEGFLKNFCKEAAT
SFFNEYGLISHQINSYNDFIQNGIQRVFSSFGEIIVEPGYDPSKKGDNEWRYALVKFGKV
TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCAKMKVNITVEVYNQRLVSSDKFKTGKER
FLDKEILSTDTRDITIGSVPVMVKSDLCWMRDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV
WFFALGVSSDKEVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD
VIKKTAFPPGESMEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKKMERMSGVVATVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTTIVSTNILESLLPELSLCGMEKLVDDTSTSLQGKFKVFLN
GDWVGVCEGSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL
NKIKALKGEKHPFKYFLNKGIIELIGAEEEEDCSTAWGIKYLFMEEKGKSAVKYTHCELD
MSFLLGLSCSIIPFANHDHARRVLYQAQKHSSQAIGFSTTNPNLRVDTLSHQLHYPQRSL
FQTMTSDCLGKPGHQLGKNRVLPKPELYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGM
FRSEHIRSYKAEVDNKHSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGD
IIIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMH
GQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSKKYA
TPFSTLSVDDIAEQLHRAGFSRCGKERVYNGGTGKMARSLIFMGPTFYQRLIHMSEDKVK
FRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQ
KCEHVANVIQRSVEGGRKIRGPYCRNCNSADDLVKANVPYGAKLLCQELFSMGISLKFET
RFA
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcggatgccaagggagatatcggtatgagcagcaagggagaaagtttt
acaaatggtgttgacatggacatcgacgatagtgattatgatgatgagtatgattactcg
actagcctgcaagatcttggggaaggatttctgaagaatttctgtaaggaggcggcaaca
tcattcttcaacgagtatggcctcattagtcatcaaatcaactcatataatgacttcata
caaaatggcatacaaagagtcttcagttcttttggcgagattatagtggagcctggctat
gacccgtcaaagaagggagacaatgaatggcgctatgctttagtgaagtttgggaaggtt
actcttggtaggccaagtttttggggtggttctgacaatgataaggaatataatatgttg
cctaggcatgctcgacttcagaacatgacatactgtgctaagatgaaagtgaatatcact
gttgaggtatataatcaacgacttgtcagcagcgataagtttaagactggaaaagaacgg
ttccttgacaaggaaattttaagtacggacaccagagacattacgattggtagtgtccct
gtcatggtcaagtctgatttatgctggatgagggacgttgagaaaggtgactgtgatttt
gaccatggtggctattttattatcaagggtgcagagaagacatttattgcacaagaacag
agctgtctgaagaaacttctcattacaaataatcagggtctgacagtagcatataggtca
gaggtgaagaggcataggttaataattagactagtcgggatttctaaacttgaaaacatt
gaaggagtagagaaagtccttaccgtttacttcatgtcgacagaaatccctgtgtgggta
tggttttttgcccttggtgtttcatcggataaagaagttattgatctgattgattatggc
agtgaagatgccagcattttgaacatactttttgcctcaattcgcgatgccgataaagct
actgaaaaagtggatggaggcttccgtagggggaagaatgccctcaaatatgtggatgat
gtgataaagaaaactgcatttccacccggggaaagcatggaagagtgcatcagcttgtat
cttttccccaatctcagaggtctaaagcaaaaggctcgctttcttgggtatatggtgaag
tccctgttacaagcctctgctggtcgcaggaaatgtgacaatagggatgactttaggaac
aagaggttggacttggcaggtgagcttctcgaacgagagctaaaggcacatattggacat
gcaaggcggcgcatggcaaaggccttgcagagagacctttatggtgatcgggttgtgcgc
ccaattgaacactacctagatgcctccatagttactaatggcatttcaagagcattctca
actggagcatggtgtcatcccttcaagaaaatggagaggatgtctggtgtagtggcaaca
gttgggcgagcaaatccgctgcagacaatgattgatatgcggaagacaaggcagcaggtt
caatatacagggaaggttggagatgccagatacccgcatccttcccactggggtaaagta
tgttttctctcaactccggatggtgagaattgtgggcttgtaaaaaatttggctaccact
acaatagtaagtacgaatatattggagtctctactacctgaattgtctctctgtggaatg
gaaaaattggtggatgatacttctacctcactgcaagggaagttcaaagtttttctgaat
ggggattgggttggagtttgtgaaggttccctctcatttgtctcggaactcaggaggatg
cgacgtaggaaaaagttgccacctcaggtggaaatcaaaagagatgaaaagcaaggagaa
gtacgagtatattctgatgctggaaggatcctacgccctctcttggtggttgagaatttg
aacaagataaaagcattgaagggggaaaagcatccattcaagtatttccttaacaaagga
ataatcgagcttattggagctgaagaagaggaagactgtagtactgcatggggcattaaa
tatctgttcatggaagaaaagggaaaatcagctgtaaagtacacacattgtgagctagac
atgtcattcctgttgggtttaagctgtagcattatcccatttgcgaatcatgaccatgca
aggagggtcctgtaccaggcccagaagcactcgtcgcaggctattgggttttctaccaca
aatcctaaccttcgagtggatacactgtctcaccaactgcactacccccagaggtcactt
tttcagacaatgacgtctgactgccttggcaaacccggacaccaactgggtaaaaacaga
gttttgccgaagcccgaattgtacaatggtcagaatgcgattgtggcagtcaatgttcac
ttggggttcaaccaagaagatagcatagtaatgaatcgggcatcactggaacgtggtatg
ttccgatctgagcatatcagaagttacaaggctgaggttgacaacaagcactccctggag
aaaaggcggaagcctgatgattgtgtcaattttggcaagatgcagagcaagtttggtcgg
gttgacaatctcgatgaagacggctttccctacgttggtgcaaacttgcagagtggcgat
atcatcattgggaggtgcagtgaatcaggagctgatcatagcatcaaactgaagcacacc
gaaaggggaatggttcagaaggttgtgctttcttctaatgatgatggaaagaactttgct
gttgtttctatgagacaggttcgctcgccgtgtcttggagacaagttctccagcatgcat
gggcaaaagggtgttctaggttttctggagtctcaagagaacttccctttcacagtacag
gggatagttccagatattgtgataaatccccatgcatttccgtcaagacaaactcctggt
caactcttagaagctgctttagggaagggaatcgcctctggtggttcaaagaaatatgcc
accccgttctctactctctctgtcgatgacatcgcagaacaactgcatagggctggattt
tcaagatgcggaaaagagagagtatacaatggtggaaccggtaaaatggctcgttccctc
atattcatgggcccaaccttttaccagcgcctgattcacatgtctgaagacaaagtaaag
ttcaggaacaccgggccagtccaccctctcacccgtcaaccagtggcagatcggaagcga
tttggagggatcaagtttggagaaatggaacgtgactgcctaatagcccacggagcttct
gcaaacttacatgagcgccttttcactctcagtgactcctcccaggtgtatatctgccag
aaatgcgaacatgtagctaatgtgatccaacgctcagttgaaggaggacggaagatcagg
ggtccctactgccggaattgcaattctgcagatgatcttgtcaaggcaaacgtcccgtac
ggagcgaagttactgtgccaggagctgttcagcatgggcatcagtttgaagttcgagact
cggttcgcttag

DBGET integrated database retrieval system