Malus sylvestris (European crab apple): 126631796
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Entry
126631796 CDS
T09027
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126631796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126631796
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126631796
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126631796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
GxGYxYP_N
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
126631796
NCBI-ProteinID:
XP_050157898
LinkDB
All DBs
Position
8:complement(29060490..29081053)
Genome browser
AA seq
1175 aa
AA seq
DB search
MTSSEREEKPTKMFGKQLAAAEDFAAVRELFRHHIESFDYLVTKGLEVLLSKIKPIEIVD
PSTNNTLTIWLGDPALYRPYKEESKMMQVPLLPFECRQAKLSYTGKFMAEVCFKYNDSGA
VIREKFNFGQLPIMLQSKLCHLRGATPQKLVSYKEEASEMGGYFILNGLERVVRLVILPK
RNHPTSMVRNSFRDRKEGYTDKAVVIRCEREDQSSVTVKLYYLRNGSARLGFWIQGREYL
LPVGVVLKALIDTTDREIYECLTCCYVENYEKGKGAVGTQLVGERAQIILDEVRDLKLFT
RHECLEHIGEHFRPLMGGLENERPSVVGDAVIMNYILVHLNKAHDKFNLLIFMVQKLFSL
VDQTSVLDNPDSLQNHEVLLPGHLITIYLKEKLEEWLQRTKKIIEDEINKNKDFDFGNVT
KVKKLMDKNPAKQISLAVENMLKTGRLNTQSGLDLQQRAGLTVQAERLNYLRFISHFRAV
HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTHICRITSFFDAQGNIRD
FSKIRESILSVLSAVGMKTSKPNLVQAGPPAAFSVLLDGCVVGSISSSKVEKVVAHLRRL
KVSAAPVIPEDLEVGYVPLSMGGAYPGLYLFTIPSRFVRPVKNISIPSVEGQNIELIGPF
EQVFMEIRCPDGRDGGRKDGFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAK
QTMAFSLQGLCNRADQKLYHLQTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLSYTGYDM
EDAMILNKSSVERGMFHGHIYQTETIDLSDQKKRSDNTPTYFKKSNVDKNPLIDSDGLPH
VGQTIKPYEEYYSFTNDTLHKPRAVKRKGTEPVIVDYVAIDGKKLLQKANIRFRHTRNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKG
GSLHGNYVDATPFASSKNANGETGPKSKTLVDELGEMLKVKGFNYHGVEVLYSGVYGTEL
TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAH
GAAYLLHDRLHTCSDYHIADVCSICGSILTSTFIQPKRVGRAVSGIPSVRAPKKVICHAC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLQVSN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtcggagagagaagagaagccgacgaagatgttcgggaagcaattggcggcg
gcggaggacttcgctgcggtgcgtgagctcttccgccaccacatagagtcattcgactac
cttgtcactaagggtctcgaggttctactcagcaagatcaagcccatcgaaattgtcgac
ccttccaccaacaatacgcttacaatctggttgggtgaccctgcgttgtaccgaccttat
aaggaagagtcgaaaatgatgcaagttcctctgctgccttttgaatgtagacaggctaaa
ctttcctacacggggaaattcatggcggaagtttgctttaagtataatgatagtggagct
gttataagagaaaagttcaattttgggcagcttcccatcatgctacagtcaaagctttgc
cacttaagaggtgctactccccaaaagctagtttcttacaaagaagaggcatcggaaatg
ggtggttacttcattttaaatgggcttgagagagtggttcggcttgttatattgccaaag
cggaaccatccaactagtatggtgcgaaattcatttcgtgatcgaaaggaaggatatact
gacaaagcagttgtaataagatgtgaaagagaagatcagtcttcagtaactgtcaaattg
tattaccttcgtaatggaagtgcaagactgggattttggatacaagggagggagtacttg
cttcctgtaggcgttgtcttaaaggctctcattgatactactgatcgtgaaatttatgag
tgtttgacatgttgctatgtcgagaactatgagaaaggaaaaggggctgttggcactcag
ctagtgggtgagagggcacaaattatcctggatgaagtgagagacttgaaacttttcact
cgtcatgaatgtctagagcacattggagaacacttccgacctcttatgggtggcttggag
aatgaacgaccttcggttgttggggatgctgttataatgaattacatattggtccacctt
aataaggctcatgacaaattcaatctgctcatatttatggtgcagaaacttttttcactt
gtggatcagacttctgtgctggacaacccagattccttgcaaaatcatgaagtcctactc
cctggtcacttgattacaatatatcttaaggaaaaactagaagagtggttgcaaaggacg
aaaaaaattattgaagatgagatcaacaaaaataaggactttgattttggcaacgtaact
aaagtaaagaagcttatggataaaaatcctgcaaagcagatcagtttagctgttgagaat
atgttgaaaactggaagacttaatactcaatctggtctagatttgcagcagagggcaggc
ttgaccgttcaggcagagaggcttaactatttacgtttcatatctcattttcgtgctgtt
catcgaggggcatcattcgctggacttcgcaccacaagtgtgcgaaaattgttacctgaa
tcttggggttttctttgccctgtccatacacctgatggtgaaccatgtggcttgttgaat
catatgacccacatttgtagaattacatccttctttgatgctcaaggaaatattagagac
ttctcaaagatccgagagtctattctcagtgttctgagtgcagttggaatgaagacttca
aagccaaatctggttcaagctggtcctcctgcagctttttctgttttgttagatggctgt
gttgttggttctatatcttccagtaaagttgagaaagttgtggctcatttaaggaggctg
aaagtgtctgctgctccagtgattcctgaggatctggaagtgggatatgttccgttaagc
atgggtggagcatatcctggtctgtaccttttcactatcccttctagatttgttcggcca
gtaaagaatatttcaattccttccgttgaaggtcagaatattgaacttattggacccttt
gaacaggttttcatggaaataagatgtcctgatggtcgagatggtggaaggaaagatggt
ttcccagcaactcatgaagaaattcatccaactggaatgctcagtgtggtcgctaatctt
acaccctggtcagatcataatcagagcccacgaaatatgtatcagtgccagatggcaaaa
caaacaatggccttctctttacaaggactttgcaatcgtgcagatcaaaagttgtaccat
cttcagactcctcagtcccctattgtacgcacaagtgcatataagaagtactgcatcgat
gaatacccaacaggcacaaatgcgatcgttgctgtactgtcatatactggatatgatatg
gaggatgccatgattctaaataagtcatctgtcgaacgcggaatgtttcatgggcatata
tatcagacagaaacaatagacttgtctgatcaaaagaagaggtcggataacaccccaaca
tattttaagaaaagtaacgtcgataaaaatcctttgattgattcagatggtcttcctcat
gttggtcagacaataaaaccatatgaagaatattatagctttacaaatgacactcttcat
aagcccagagccgtcaaacggaaaggtacagaacctgttatagttgactacgttgctatt
gatgggaagaaactcctccagaaggcaaacatacgctttcgacacactagaaaccccatc
attggtgataaatttagcagccggcatgggcaaaaaggtgtttgctcccagttgtggcct
gatattgatatgccattttctggggttacgggaatgcgtccagatctaatcatcaatccc
catgcatttccttctagaatgacaatagctatgctgttggaatcagttgctgcaaagggc
ggtagcttacacggaaactatgttgacgcgactccatttgctagttcaaagaatgctaat
ggagagactggaccaaaatccaaaacccttgttgacgaacttggtgaaatgttaaaggtt
aaagggtttaactaccatggtgtagaagttctgtacagcggggtttatggcacagaactc
acgtgcgagatctttattggccctgtttattatcaacgactacgacatatggtttcagac
aaatttcaggttcgctccactggaacggtagaccaggtcactcgccagcctatcaaagga
cgaaagcgaggtggtggcatacgttttggtgaaatggagcgcgactccatgcttgcgcat
ggggcagcatatctgttgcacgacaggcttcatacctgttctgattatcacattgccgat
gtatgttccatatgtggaagcatcctaacgtccacattcatccaaccaaaacgggttggg
cgtgcggtttcaggaattccgtctgtaagagctcccaagaaggtcatctgccatgcttgt
aagacaagtaaagggatggagacagttgcaatgccctatgtcttcagatatttagctgca
gagttggcgtcaatgaacataaaaatgactcttcaggtaagtaattga
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integrated database retrieval system
