KEGG   Malus sylvestris (European crab apple): 126631938
Entry
126631938         CDS       T09027                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126631938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126631938
   03036 Chromosome and associated proteins [BR:msyl03036]
    126631938
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     126631938
Chromosome and associated proteins [BR:msyl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    126631938
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Vitelline_membr
Other DBs
NCBI-GeneID: 126631938
NCBI-ProteinID: XP_050158108
LinkDB
Position
8:27359604..27364920
AA seq 347 aa
MSNFMAASNPNTNPNKSFEVTPPPNDSISSLSFSPKSNILVATSWDNQVRCWEIHQSGQN
LASVPKASISHDQPVLCSTWKDDGSTVYSGGCDKQVKMWPLAGNQPVTVAMHEAPIKEIA
WIPEMNYLVTGSWDKTLKYWDLRQQTPIHTQPLPERCYTLSVRYPLMVVGTADRNLIVFN
LQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGLQSKNFTFKCHR
EGNEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMARCSQPIPCSAFNSDGS
IFAYAVCYDWSKGAENHNPATAKNYIYLHVPQEAEVKGKPRINAGKR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtcgaatttcatggctgcttccaatccgaatacgaatccgaacaagtcctttgaggtc
acccctccaccgaacgactcgatatcaagcctaagcttcagtcccaagagcaacattctg
gtcgccacctcctgggataaccaggtgcgatgctgggagatacaccagagtggacaaaat
cttgctagtgtgcccaaggcatccatatcccatgaccaaccggttttgtgctcaacctgg
aaggatgatggatcaacagtgtactccggagggtgcgacaaacaagttaagatgtggcct
ttggctggtaaccaaccagtgaccgttgccatgcatgaagcacccataaaagagattgca
tggatcccggagatgaactacttagtcacaggaagctgggacaagactttgaagtattgg
gatctgaggcagcaaactccaatccatacccaacctctacctgagcgctgctacactcta
tcagtgagataccctctaatggttgttggcactgcagacagaaatctgattgtttttaac
ttgcaaaacccacagacagaattcaagagaattgtttcacccctaaagtatcaaacaagg
tgtgttgctgcatttcctgatcagcaaggattcttggttggttctattgaagggagggtt
ggtgtacatcatctggatgatggactacaaagtaaaaactttaccttcaagtgccataga
gagggcaatgagatatactcagtcaactctctgaacttccatccggtccatcacacattt
gctaccgctggttctgacggttctttcaatttttgggataaggatagcaaacagagacta
aaggcaatggcaaggtgcagtcaacctattccttgcagtgctttcaacagtgatggttcc
atatttgcatacgcagtttgctatgattggagcaagggcgctgaaaatcataatcctgct
actgcaaagaactacatttacctccatgtgccccaggaagctgaggttaaaggcaagcca
agaatcaacgctggaaaacggtga

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