Malus sylvestris (European crab apple): 126631938
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Entry
126631938 CDS
T09027
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126631938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126631938
03036 Chromosome and associated proteins [BR:
msyl03036
]
126631938
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126631938
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126631938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
126631938
NCBI-ProteinID:
XP_050158108
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All DBs
Position
8:27359604..27364920
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AA seq
347 aa
AA seq
DB search
MSNFMAASNPNTNPNKSFEVTPPPNDSISSLSFSPKSNILVATSWDNQVRCWEIHQSGQN
LASVPKASISHDQPVLCSTWKDDGSTVYSGGCDKQVKMWPLAGNQPVTVAMHEAPIKEIA
WIPEMNYLVTGSWDKTLKYWDLRQQTPIHTQPLPERCYTLSVRYPLMVVGTADRNLIVFN
LQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGLQSKNFTFKCHR
EGNEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMARCSQPIPCSAFNSDGS
IFAYAVCYDWSKGAENHNPATAKNYIYLHVPQEAEVKGKPRINAGKR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttcatggctgcttccaatccgaatacgaatccgaacaagtcctttgaggtc
acccctccaccgaacgactcgatatcaagcctaagcttcagtcccaagagcaacattctg
gtcgccacctcctgggataaccaggtgcgatgctgggagatacaccagagtggacaaaat
cttgctagtgtgcccaaggcatccatatcccatgaccaaccggttttgtgctcaacctgg
aaggatgatggatcaacagtgtactccggagggtgcgacaaacaagttaagatgtggcct
ttggctggtaaccaaccagtgaccgttgccatgcatgaagcacccataaaagagattgca
tggatcccggagatgaactacttagtcacaggaagctgggacaagactttgaagtattgg
gatctgaggcagcaaactccaatccatacccaacctctacctgagcgctgctacactcta
tcagtgagataccctctaatggttgttggcactgcagacagaaatctgattgtttttaac
ttgcaaaacccacagacagaattcaagagaattgtttcacccctaaagtatcaaacaagg
tgtgttgctgcatttcctgatcagcaaggattcttggttggttctattgaagggagggtt
ggtgtacatcatctggatgatggactacaaagtaaaaactttaccttcaagtgccataga
gagggcaatgagatatactcagtcaactctctgaacttccatccggtccatcacacattt
gctaccgctggttctgacggttctttcaatttttgggataaggatagcaaacagagacta
aaggcaatggcaaggtgcagtcaacctattccttgcagtgctttcaacagtgatggttcc
atatttgcatacgcagtttgctatgattggagcaagggcgctgaaaatcataatcctgct
actgcaaagaactacatttacctccatgtgccccaggaagctgaggttaaaggcaagcca
agaatcaacgctggaaaacggtga
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integrated database retrieval system