Malus sylvestris (European crab apple): 126631957
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Entry
126631957 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126631957
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126631957
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126631957
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126631957
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126631957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
126631957
NCBI-ProteinID:
XP_050158129
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All DBs
Position
8:24321943..24329216
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AA seq
1124 aa
AA seq
DB search
MHVAGDLGFRSLVLVACFLAPVIGFFVVRRKWRLANARREEIRRLLVLAKEEAARAEFEV
TAGYGAASVAEIKGPYCVVCYCPTTTRCARCKAVRYCSGKCQIVHWRQGHKEECRPSTIV
HQNIDVGSDSGLKVTKEDLEINTDKFQSRQSVEKSSEEPALPNPHCFPDVECIRDDDSED
EFLAERKGTNCTSDSAATSFSGFSTSASGTESSDDVSVSGSVSSFEPDRSDGQPSANDAF
DIHQIPFNVHNIDQSKPSSPKFASLVDSVDGFAKLSKLNQVKPSINDEENEQRSNFSSGL
NDSGMSEGPVAESCTPSSDFWGNTLDSVGSRSDAQVSNSSVASNRKISDSGDSLHFSFNL
SGSTAAPLHRLGSKSRGTRLGDDLLDSSELSKSTHGADLSEKISGDAVKVKNSPSQNSKG
SKKEDNESSSNSHALKFREIKSMSSSSPSVHRSLGTERVSKSTDALNSSRVLSTSSERSG
HAVKNCSRTSDVLKSREAGTPSPSVSDARLASAVGGALPRVKSGKVDCVEASDTVSSQAT
NLSNDRNGLKTSVFKVFDQFRGSKIPKHYPSGVGSEIAGKYSEKELFSYELFVKLYNWNK
VELRPSGLINCGNSCYANAVLQCLSFTPPLTAYLLQGLHSKDCVKKGWCFMCEFESLVSM
AKDSPLSPMGILSQLRKNGSQLGNGREEDAHEFLRYAIDMMQSVCLTETGVNSSCSLNEE
TTLIGLTFGGYLRSKIKCTKCQGKSERQERMMDLTVEIEGDIGTLEEALRRFTGTETLDG
ENKYQCSSCKSYEKAKKKLTILEAPNILTIALKRFQSGKFGKINKPIRFPEILDLAPFMS
GTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVRNSHNKWFKVDDSTVTPVELEKVLMKG
AYMLLYSRCLPRAPRLIRNRIISNDPKHRAIPSWIGGRATNLKPKSVSRLSTHSGVDHSV
PNAYPPEELRRILEEDSSSDNSSLISNNSDESSISTGSTCCSTSTDDLSDYIFGHSGRGW
SSSWRNFSDSDTSSSSSSSPSSTKHSPLSDSNRYASVSPETIGSSKPADSDGAVTVTFLH
SDTSKQCRRLASSSSRNRETGTERLGPDSLGDVKFRKSIVEKER
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggctggggatctagggtttcggagcctcgtgctggtggcttgttttctggcg
ccggtgatcggattcttcgtggttcggagaaaatggcgcctcgctaacgccaggagggag
gaaatcaggagacttttggtcttggccaaggaggaagctgctagagctgagttcgaggtc
acggctgggtacggcgccgcttcggtggctgagattaagggtccttattgcgttgtttgt
tactgccccaccaccacgcgctgcgcccgctgcaaagcggttcgctactgttctgggaag
tgtcaaattgttcactggcgacaaggtcacaaggaagagtgtcgtccttctaccatagtt
caccagaatattgatgtgggaagtgattctggcctgaaggtaaccaaagaagaccttgaa
attaataccgacaagtttcaaagcaggcagtctgttgaaaaatcttctgaggaacctgca
ttgcctaatcctcattgctttcccgatgttgaatgtataagggatgatgatagtgaagat
gaatttcttgccgagaggaaaggaacaaattgtacgtctgactcagcagctacctctttt
tctggattttctacttctgccagcggtactgaatcttcggacgatgtttctgtcagtggg
agtgttagttcatttgaacctgacagatcagatgggcaaccatccgctaatgatgccttt
gacatccatcagattccctttaatgttcacaacatcgatcaatctaagccatcatctcca
aagtttgctagcttggttgattctgttgatggttttgctaagttaagtaagttgaatcag
gttaaacctagtattaatgatgaagaaaatgagcagagatcaaatttttcttcaggtttg
aacgacagtggcatgagtgagggtccagttgctgagtcttgtacaccttcctctgatttc
tgggggaacactcttgattccgtagggtccaggagtgatgcccaagtgtccaattccagt
gtagcgagtaatagaaagatatctgattctggagattccttacatttttcattcaacttg
tctggaagtactgcagctccccttcatagactaggctccaagtcaaggggcacgaggtta
ggtgatgatcttctagattcttcggagctcagtaagtctactcatggagcagatttatca
gaaaagattagtggagatgctgttaaggtcaagaattccccatcacagaacagtaaaggg
tcgaaaaaagaggataatgaatctagcagtaattcacatgccttgaagttcagagaaatt
aagtcgatgtcatcctcctcgccttcagttcatagatctcttggcactgagagagtttca
aaaagcacagatgctctgaactctagtagagtgctatccacaagttcagaaaggtcaggt
catgctgttaagaactgcagcagaacttctgatgttttaaagtctagggaagctggaact
ccatcacccagtgtttctgatgctcgccttgcatctgctgttggaggcgcacttccacgt
gtaaaatctggaaaagtggactgtgttgaggctagtgatactgtttcatctcaagccaca
aatctttcaaatgataggaatggcttgaaaacctctgtatttaaggttttcgaccagttt
agaggatccaaaataccaaagcactatccttcgggagttgggagtgagattgcaggaaaa
tatagcgagaaggaacttttttcgtatgaattatttgtcaagctttacaattggaacaag
gtggaattgcgcccttctggccttataaattgcggtaacagctgttatgccaatgcagtg
ttacagtgcttgtcatttactccacctctgactgcttatttgcttcaaggactccattct
aaagattgtgtaaagaagggatggtgtttcatgtgtgagttcgaaagtctagtttcaatg
gcaaaggactctcctctgtctcctatgggaatcctttcccagttaagaaaaaatggaagt
caacttggtaatgggagagaagaagatgcccatgaatttctaaggtatgcaattgacatg
atgcaatctgtttgccttacggaaactggggttaattcatcgtgctctttgaacgaagaa
acaactttaataggccttacatttggaggctaccttcgatcaaagataaaatgcacaaag
tgccaaggcaagtctgagcggcaggaaagaatgatggatcttactgtagagattgagggt
gatataggaaccctggaagaggctcttcgtcgatttacgggtactgagaccttggatggg
gagaacaaataccaatgtagcagttgcaaatcttatgagaaggccaaaaagaagttgaca
atactggaagctccaaatatccttacaattgcactaaagcgttttcagtctggtaagttt
gggaagatcaataagcctatccgttttcctgagatcctggacttggcaccttttatgagt
ggtacaagtgataaatcgcctatatacagactttacggggtggttgtgcacttagatatc
atgaatgcggcattttctggtcactacgtgtgctatgtcaggaattcccacaacaagtgg
ttcaaggttgatgacagcacggtaacccctgtggaacttgaaaaggtcttgatgaaaggc
gcttacatgcttctttattcaagatgcttgccaagggccccgagattgataaggaacaga
attatatctaatgatcccaaacatcgagccattccttcttggatcggtggaagggctacc
aacttgaaacccaaatctgtctccagactctccacacattctggtgttgaccattccgta
cccaatgcatatccaccagaggagctgcgaaggattttggaagaggactcatcaagtgac
aattcttcccttatcagcaacaactccgacgaaagttctattagtactggtagtacttgt
tgctctaccagcaccgatgacttgtccgattacatatttggtcattcagggcgtggttgg
agtagctcctggagaaatttttcggattccgacacttcttcctcatcctcttcctcaccc
tcgagtactaagcattcacccctctctgattcgaacaggtacgcttcagtttcccctgaa
actattgggagtagcaagccagcagattcggatggcgcagtgacggttacttttttgcac
tctgataccagtaaacaatgtagaaggctagcaagtagtagtagtagaaatagggaaacc
ggcacggagagattaggacccgactctttgggggatgtaaaatttagaaaatcaatagta
gagaaagaacggtaa
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