Malus sylvestris (European crab apple): 126631958
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Entry
126631958 CDS
T09027
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msyl03012
]
126631958
Translation factors [BR:
msyl03012
]
Eukaryotic type
Initiation factors
eIF-3
126631958
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
DUF6038
Regnase_1_C
Motif
Other DBs
NCBI-GeneID:
126631958
NCBI-ProteinID:
XP_050158130
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Position
8:complement(24298349..24302981)
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AA seq
942 aa
AA seq
DB search
MASRFWTQPGSDSEDEESDYEEEVEPTGGETTTEPGLNPYLQVNASDSEDSDDQKRVVRS
AKDKRFDELSATVHQMKNAMNINDWVSLQESFDKINKQLEKVMRVTEAVKVPTLYIKALV
LLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPEQSEDDKP
PEEESDDSDGTDSVIDPNDIVSSDNEGPDEDDPEEDEPTEEGWQKKMSKKDKLMDKQFSK
DPSEITWDSVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQF
DVNPGLNGHMPINVWKKCVQNMQVILDILVKYPNIAVDDMVEPDENESQKGPDHDGTIRV
WGNLVAFLERIDTEFFKSLQCIDPHTREYIERLRDEPMFLVLAQNVQEYLEQVGNYKAAA
KVALRRVELIYYKPQEVYDAMRKLADHTGDSDNGEEPKAAEESRAPSSFIVVPELVPRKP
TFSESSRTMMDILVSLIYKYGDERTKARAMLCDIYHHALLDQFSTSRDLLLMSHLQDNVQ
QMDISTQILYNRAMAQLGLCAFRNGLITEAHSCLSELYSGGRVKELLAQGVSQSRYHEKT
PEQERLERRRQMPYHMHINPELLEAVHLICAMLLEVPNMAANTHDAKRRLVSKTFRRLLE
VSEKQTFTGPPENVRDHVMAASRALGKGDFQKAIDVINSLDIWKLLRNREHVLEMLKAKI
KEEALRTYLFTFSSSYKTLSLEQLSMLFDLTEAQTHSIVSKMMINEELLASWDQPTRCIV
FHDIEQTRLQALAFQLTEKLSILAESNERATEARIGGGGGLDLPQRRRDNQDYGAGSVAG
SGGRWQDNMSFNQRQGGGAGRTGYNTGGRQFNQNAGGGYNRDRTGQYRGTGQNTRYQDGA
YAGSGRSARGSQDTSKSHGQSKQGASRLNIYKRSIVIQQHFD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgattttggacccagcctgggagcgattctgaggacgaggagagcgactat
gaggaggaggttgaacctacaggtggtgagactaccactgaaccaggcctaaacccttac
cttcaggttaatgcaagtgatagcgaagattctgatgaccagaagcgagttgttagatca
gcgaaggacaagcgttttgatgaattgtctgctactgttcatcaaatgaagaatgccatg
aatatcaatgactgggttagcttgcaggagagctttgacaagataaataagcagcttgag
aaggtcatgcgtgttaccgaggctgtaaaagtacctactctttacataaaagctcttgta
ttgttggaagactttctggctcaggctttagcaaacaaagatgctaagaagaagatgagt
agtagcaatgccaaggccttgaactcaatgaaacagaaactgaagaagaacaataagcaa
tatgaggacttgattaataaatatagggagaatcctgagcagagtgaagatgataagcct
ccagaagaggaatcggatgatagtgatggaacagattctgtaattgatcctaatgatatt
gtgtcttcagataacgaaggaccggatgaggacgacccagaagaggacgagccaactgaa
gaaggttggcagaagaagatgagtaagaaagataagctcatggataagcaatttagtaag
gaccctagtgagatcacatgggatagtgttaacaagaaatttaaagaggttgtggctgct
cgaggcaggaagggaactggaaggtttgagcaggtcgagcagcttacgttcttgacaaag
gttgctaagacccctgcacagaagctggagatatttttcagtgttgtttctgctcagttt
gatgtgaatcctggcctcaacgggcacatgcctataaatgtgtggaagaagtgtgtgcag
aatatgcaagttatacttgatattcttgtgaagtatcctaatattgcagtggatgacatg
gtagagcctgatgaaaatgaatcccagaagggaccagatcatgatgggacaattagggtt
tggggaaacttggtggccttcttggaaaggatagatactgaattcttcaagagcttgcaa
tgcattgatccccacactcgtgagtacattgaaagactcagggatgaacctatgtttttg
gttctagctcaaaatgttcaagagtatttagaacaggttggaaattacaaagccgctgcg
aaggtagccctaaggcgggtcgaacttatttattacaaaccacaagaagtttatgatgcc
atgcgaaaattggctgaccatacaggagatagtgataatggtgaagaacctaaagctgct
gaggaaagtcgtgctccatcttcatttattgtagttcccgagctcgttcctcgaaaaccc
accttctctgagagtagcaggacgatgatggatatattggtttccctcatatacaagtat
ggagatgagaggactaaagctcgagcaatgctttgtgatatttaccaccatgctctactg
gatcagttttccacctcccgtgacttgctgcttatgagtcacctgcaagataatgttcag
cagatggacatttcaacccagatactttataacagggccatggcccaacttggtctgtgt
gcatttcgtaatggattaattactgaagcgcatagctgcctttctgaactgtattctggt
ggaagagtgaaagagttgcttgcccaaggtgtctcacaaagtagatatcacgagaaaact
cccgaacaggaaaggctggagaggagacgacaaatgccttaccatatgcatatcaaccct
gaactcctggaggcagtgcatttgatatgtgccatgctcctggaagtgcctaatatggca
gctaacacccatgatgcgaagcgcagactggtcagcaagacgttccgacggttgcttgag
gtcagtgagaagcaaacattcactggtcctccagaaaatgttagggaccacgtaatggca
gcttccagagcccttggcaaaggtgacttccagaaggccattgatgtcatcaattctctt
gatatttggaagctcctgaggaaccgtgagcatgtccttgagatgctcaaggctaagatc
aaggaagaagctctcaggacctatctttttaccttctcctcatcctacaagactctgagc
ttggaacaactcagcatgttgtttgaccttacagaggcccagacacacagcattgttagc
aagatgatgatcaacgaagagctccttgccagttgggaccagccaacacgttgcattgtt
ttccatgacattgagcagactaggctgcaggcgctagcgttccagttgactgagaagctg
tcaatccttgcagaaagtaatgaaagggcaacggaagcaagaattggtggcggtggtgga
ttagatctacctcaaaggcgcagagacaaccaggactatggtgctggatcagttgctggg
agtggcggtagatggcaagataacatgtccttcaatcaaaggcaaggtggtggtgctggg
cgcacaggatacaacactggagggagacaattcaaccaaaatgctggaggtggctataat
agggaccgcacaggtcaatacagagggacagggcaaaacacccgttatcaagatggtgca
tatgcgggatcagggaggtccgccaggggttctcaggatacttccaagtcgcatggtcag
tctaaacaaggggcttcgcgcttaaacatctacaaaagaagcatagttattcagcagcat
tttgattag
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