Malus sylvestris (European crab apple): 126632087
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Entry
126632087 CDS
T09027
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
126632087
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
126632087
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
AHSA1
Motif
Other DBs
NCBI-GeneID:
126632087
NCBI-ProteinID:
XP_050158270
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Position
8:complement(25660604..25666164)
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AA seq
638 aa
AA seq
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MSSAAVRLHIQGPHVVMDNGILQVTLSNPDGIVTGIRYNGIDNLLEPLNKETNRGYWDLV
WSAPGSKGIFDVIKGTTFKVIVENEEQVELSFSKMWDHSLEGKYVPLNIDKRFVMLRGSS
GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVSDNRQRYMPLPDDRLPGRCQTL
AYQEAVLLVNPKMKDLAGEVDDKYQYSCDNKDNKVHGWICTNPPVGFWQITPSDEFRSGG
PLKQNLTSHVGPTTLAMFLSGHYAGQDLVPKFRGGEPWKKVFGPVFIYLNSSTIKDDPFW
LWEDAKIQMMTEVQSWPYSFPASEDFQKSDQRGNVSGRLLVLDRYICEQYTPAGGAYVGL
APPGDVGSWQRECKDYQFWTTADDRGYFAINNVRTGNYNLYAWVPGFIGDYRYDAVIDIT
SGSFIEMGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPDPKYVNKLFINHPDRFRQYGL
WSRYAEIYPDEDLVYTIGVSDYAKDWFFAQVPRKTDNGHEGTTWQIKFELKNVDRNTTYK
LRVAIASATLAELQVRINDPNSRRPLFTSGLIGRDNSVARLGIHGIYWLYNMNVPSNQLV
EGNNTFFFRQPRCTSPFQGIMYDYIRFEGPPPCNLSSS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgccgcggtgcgattgcatattcaaggtccccatgtggtgatggataatggc
atactccaagtcaccttatcgaacccagatggcattgtcactggaatacgatataatggc
attgacaatttgcttgagcctcttaataaggaaactaacagaggttattgggaccttgtt
tggagcgcaccaggaagtaagggaatatttgatgtgataaaaggtacaacttttaaggtt
atagtggagaatgaagaacaggttgagctctcgttttcaaaaatgtgggatcactctctt
gaggggaaatacgttcccctaaatatagacaaaaggtttgtaatgcttcgtggttcctcg
ggcttctactcctatgccatttatgagcacctgaaggattggcctgatttcgacattggt
gaaaccagaataaccttcaaactgagaaaagacaagttccaatacatggctgtatcagac
aacaggcagagatacatgcccctacctgatgaccggttaccaggacgatgccaaaccctt
gcctaccaagaagctgtcctacttgtcaatcccaagatgaaagacctcgcaggagaggtg
gatgacaagtaccagtattcttgtgacaacaaagataataaggttcatgggtggatatgc
accaacccaccagttgggttttggcagatcacgcccagtgatgaatttcgatctggtgga
cctctgaaacagaacctaacctcacatgtcggccctaccactcttgctatgtttcttagt
ggtcattatgcgggacaagatctggtgccaaaatttagaggtggtgaaccatggaagaag
gtttttggccctgtttttatctatctcaattcttccacaatcaaagatgatccgttttgg
ctatgggaggatgctaaaatacagatgatgacagaagtacaaagctggccatatagtttc
ccagcatctgaggattttcaaaagtcggatcaacggggtaatgtgagtggtagactactt
gtcttggacaggtacatatgtgaacaatacacaccagcaggtggtgcatatgttggtctt
gccccaccaggagatgtgggatcatggcagagagaatgcaaggactatcaattctggaca
acagcagatgaccgtggctattttgctattaacaacgtgcgtactggtaattataatctt
tatgcatgggtgcctgggtttattggtgattaccggtatgatgctgtcattgacataacc
tcaggttcttttatcgaaatgggtgatcttgtgtatgagcccccaagagatgggccaaca
ttgtgggaaataggcattcctgatcgttctgctgcggagttttatgttcctgatcctgat
ccaaaatatgtcaacaaacttttcataaatcatcctgacagattcaggcaatatgggctg
tggagcagatatgctgaaatatatcctgatgaagacttagtttacactatcggtgttagt
gattatgctaaagattggttctttgctcaggttcccaggaaaacagacaacggacatgaa
ggaacaacatggcagattaagtttgaactgaaaaatgtggatcggaacactacctataaa
ttgcgagtggctattgcatctgcaactcttgctgaattgcaggttcggattaatgatcca
aattcaaggcgacctctatttactagtggattgatagggagggataattcggttgcgaga
cttggaattcatgggatttactggctgtacaacatgaatgtaccaagcaatcagcttgtt
gaggggaataacactttcttcttcagacaaccaagatgcaccagtcctttccaagggatt
atgtacgattatatacgatttgaaggtcccccgccttgtaatttgagttcatcttag
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