Malus sylvestris (European crab apple): 126632114
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Entry
126632114 CDS
T09027
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126632114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126632114
03036 Chromosome and associated proteins [BR:
msyl03036
]
126632114
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126632114
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126632114
Chromatin remodeling factors
BAF complex
126632114
PBAF complex
126632114
GBAF(ncBAF) complex
126632114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
126632114
NCBI-ProteinID:
XP_050158308
LinkDB
All DBs
Position
1:14756451..14767797
Genome browser
AA seq
2258 aa
AA seq
DB search
MQSGGGGGGGPGRGVGPAGRAGSTSSAASPSSSSSAVSTPRLGFDSVQHQQHQQQQQQQQ
QLGSRQPLHQQQFLRKPEGNEALRAYQVAGMQGVLGGGNFVSSSGSSQMPQQSRKFIDLA
QQHGSQDGQSRSQGVDQQGLNPVHQVYPQYAFQAAQQKSGLTMQPQQQAKMGSLGPPSGK
DQDMRLGNMKMQELMSNPGSSQAQASSSKNLMEHFTGGEKQMDQGQPPVSDRRSDSKPSA
QPSGMSQFMPGNMLRPMLAPQSQPSAQTMPNNQIAFAAQLQAFALEHNIDLSQPGNANLM
SQLIPLLQSRIATQQKANESNMGAQSSPVPVSKQQVTSPLVVRESSPHANTSSDVSGQST
SAKAKQTVAANPFVSGSNNSIFNNSSSIPMQQFSVHGRENQMPPKQSNTIGNGMTSTHPT
QSANTSQGVDHSSHVKSSQYNPETLQMPYHRQVSGSSPQAVVPNDGGSGNKNQSQGGLAT
RMGQQHHGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQLQQQLLPGGG
NIQDKSSGKVLEDHVRHMESNEKDSQAVASKNAQNITKEEAFTGEEKATVSTIQVQGKPA
VVKEPSPLVSSGKEEQHSTLSSVKSDHEVERGIQKASVRSEIPVDRGKSVASQVTVSDAM
QVKKPAQSSTVPQPKDVSSARKYHGPLFDFPFFTRKHDSIGSGVMVNNNNNNNNLALAYD
VKDLLFEEGVEVLNKKRTENIKKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLFDLQAR
LRDEIDQHQQEIMAMPDRPYRKFVRLCERQRMELSRQVQVSQKAMREKQLKSIFQWRKKL
LEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNRRMEALKNNDVERYREMLLEQQ
TSIPGDAAERYAVLSSFLSQTEEYLHKLGSKITAAKSQQEVEEAANAAAAAARLQGLSEE
EVRAAAACAGEEVMIRNRFIEMNAPRDGSSVNKYYSLAHAVNERVVRQPSMLRTGNLRDY
QLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVN
WKSELHTWLPSVSCIYYVGGKDQRAKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWK
YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK
AFHDWFSKPFQKEAPTPNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGALPPKI
SIVLRCKMSAIQSAVYDWIKSTGTIRVDPEEEKLRVQKNPQYQPKVYKTLNNRCMELRKT
CNHPLLNYPFFNDFSKDFLVRSCGKLWILDRILVKLQRTGHRVLLFSTMTKLLDILEEYL
QWRHLIYRRIDGTTSLEDRESAIVDFNRPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDP
DPNPKNEEQAVARAHRIGQKREVKVIYLEAVVDKMASHLKEDELRSGGTVDSEDDLAGKD
RYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETLHD
VPSLQEVNRMIARSEEEVELFDQMDEELDWIEEMTRYNQLPKWLRTSTKEVNAVIASLSK
KPSKTTLLGGNIGLESTEMGSDSSPKTERKRGRPKKIHPSYKELDDDDCEYFETSSDERN
GYSLHEEEGEVEEDDDYSGAVEATPIIKEQVEEDVPECDGGYEYPQDSERVRNNQILEEA
GSSGSSSDSRRVMQTVSPVSSQKFGSLSALDGRPGSASKRMQDDVEEGEIVVSGDSHMDQ
LDHQQSGSSNHDRDEGEDEQVLQPKIKRKRSLRVRPRHTIERPEEKSGSETPSLQRGDSS
LLPFHVDHKSQAQSRADSEIKIYGEPHAVKHDQSDSSSKTKRILPRRGSNMSKVHVKSGR
SNGMPDPVEDAAEPHRENWEGKVGNISGTSVYGTKMSEIVQRKCKNVISKFQRRIDKEGP
QIVPLLTDLWKRFENSSYASGSGNNLLDLRKIDQRIERLEYNGVMELVSDVQSMLKNGMQ
FYGFNYEVRTEARKVHDLFFDILKIAFAETDFREARSALSFTSPVLTSNAPSPRAVTVGP
SKRHRLMNDVEPDPVHQQKPQQRAPIFNSEDTRVRSHMPQKESRLGSGSGNSRDYYQQDD
SPPPAHPGDLVICKKKRKDREKSVVKTRTGSAGPVSPPSVGRGIRSPGPNSVAKQTPHPQ
GWANQSGQPTNKGGGSVGWANPVKRLRTDSGKRRPSHL
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggtggaggaggaggcgggcccggcaggggagtgggcccggctggccgt
gccgggtcgacgtcgtcggctgcttcgccgtcttcatcgtcctcggccgtgtcaacgcca
cgtctgggttttgattcggtgcagcatcaacaacatcagcagcaacagcaacagcagcag
caattggggtctagacagccattacaccaacaacaatttttaagaaaacctgaagggaat
gaagcacttcgagcatatcaagttgctggtatgcaaggagttttgggtgggggcaatttt
gtttcatcttccggctccagtcaaatgcctcaacaatctaggaagttcattgatttggct
caacaacatggctcccaggatggacagagccggagtcaaggtgttgaccagcaaggatta
aatccggttcatcaagtttatcctcagtatgcttttcaggcagcccagcagaagtcaggt
ttgacaatgcaacctcagcagcaagcaaaaatgggatcattggggccaccatctggaaag
gatcaggacatgcgattgggaaatatgaaaatgcaggaactcatgtctaatccgggatct
agtcaggcacaagcatcatcgtctaagaatttgatggaacattttactggtggagaaaag
cagatggaccaaggacagccaccagtctctgaccgaaggagtgactcgaagccttcagcc
cagccatcaggaatgagtcaattcatgcccggaaacatgttaaggccaatgctggcacca
cagtctcagccaagtgcccaaaccatgccgaataaccagattgcattcgctgctcagttg
caagcatttgcacttgagcacaacattgatctttcacagcctggaaatgccaacttaatg
tcacagctcattccactgttgcagtcgaggattgctactcaacagaaagcaaatgaaagc
aacatgggtgcacaatcctcacctgttcccgtgtccaagcagcaggttacttctcctcta
gtagtgcgtgagagttctcctcatgctaatacatcaagtgatgtatctgggcaatctacc
tctgcaaaagcaaagcagacagttgcggctaacccttttgtttcaggttcaaataatagc
atctttaacaatagtagcagcattcctatgcagcagttttctgttcatggcagagaaaac
cagatgccacctaagcagtcaaatactattggaaatggaatgacttctacccatcccaca
cagtctgcaaacacaagccagggtgtggatcactcttcccatgtaaaaagttcacaatac
aatccagaaacattgcagatgccataccatcgacaggtgagtgggtcttctccacaagct
gtggttcctaatgatgggggttctggcaacaagaaccagtcacaaggtggacttgctacc
cggatgggacagcaacaccatgggttcactaaacagcagctgcatgttcttaaagcgcaa
atactagcatttaggcgactcaagaaaggtgaaggcacactcccccaagaacttctacgg
gctattgctccaccacctcttgagctgcagctacagcagcaattgcttcctggaggagga
aacattcaggataaatcttctgggaaagttttagaagatcatgtgcgtcatatggagtcc
aatgagaaagattcacaggctgtggcatcaaagaatgcacagaacattacaaaagaggaa
gcttttaccggagaagagaaagcaactgtatcaaccattcaggtgcaaggaaagcctgct
gtggtgaaggaaccttctcccttggtgtcttctggaaaagaagagcaacattctacatta
tcttctgtaaagtcagaccatgaagttgaacgtggtattcaaaaagcttctgttagaagt
gagattccagttgataggggaaagtccgttgcatcacaggtcactgtatccgatgccatg
caagtaaaaaagcctgcacaatcaagcactgtaccgcagccaaaagatgttagctctgct
agaaagtatcatggacctctgtttgatttcccctttttcactaggaaacatgactctatt
ggttcaggggtgatggtaaataataacaacaacaataataatctagcattggcatatgat
gtcaaagatcttctttttgaggaaggtgtggaagttcttaacaagaagaggacagaaaat
atcaagaagattggtgggcttttggcagtaaatttggaaaggaaacggattaggcccgat
cttgtcttgcggttgcaaattgaagaaaagaagcttcgactttttgatttacaggcacgc
ttaagagatgaaattgatcaacatcagcaggagataatggcaatgcctgacaggccttat
cggaagtttgttcggctttgcgaacgtcagcggatggagctgtctaggcaagtgcaggtc
tcccagaaagccatgagagagaagcaactgaaatctattttccagtggcgtaagaagctt
ctagaagctcactgggccattcgtgatgcgcggactgcacgtaacaggggagttgccaaa
tatcatgagaggatgctgagggagttttcgaaaagaaaggatgatgataggaatagaagg
atggaagcactgaagaataatgatgttgaaaggtacagggaaatgttgctggaacagcag
actagtatcccaggggatgcagcagagagatatgctgttttatcatctttcttgagtcag
actgaggaatatcttcataagcttggaagtaaaataacagcagctaagagtcagcaagaa
gtggaagaggcagcaaatgctgctgcagctgctgcacgtttacagggtctctcagaggaa
gaagttagggcggcagcggcttgtgctggagaggaagtaatgattagaaatcgatttatt
gaaatgaatgcacctagagacggttcatctgttaacaagtattatagtcttgcacatgct
gtgaacgagagggtcgtaaggcaaccctcgatgttacggactggaaacttaagagattat
caacttgttgggttgcaatggatgctttctctgtataacaacaaattaaatggaatatta
gcagatgaaatgggtcttgggaaaacagtgcaggtaatggcattgattgcatatttaatg
gagttcaaagggaactatgggccgcatctcataattgttccaaatgctgtcttggtaaat
tggaagagtgagttgcatacttggcttccatctgtgtcctgcatttattatgttggtggg
aaagatcaacgggcaaaattgttttcccaagaggtttgtgccttgaagtttaatgtcctc
gtgacaacttatgagttcatcatgtacgatcggtccaaactctccaaaattgattggaag
tatataataattgatgaagcacaaaggatgaaagacagggaatcggttctagcacgtgat
cttgataggtatcgttgccaaagacgcttgctcttgacaggaacaccattacagaatgat
ttaaaggaactctggtctcttttaaatctgcttcttccagaagtatttgataatcggaaa
gcatttcatgattggttttcaaaaccctttcaaaaggaagcccctacaccaaatgcagaa
gatgactggcttgaaactgaaaaaaaggttatcatcattcaccgacttcatcaaatttta
gagccttttatgcttaggcggcgtgttgaagacgtggaaggtgcactcccgcctaagatc
tccattgttttaaggtgtaaaatgtcggctattcaaagtgctgtatatgactggatcaaa
tcaacaggcactattcgagtagatcctgaagaagagaagctaagggttcaaaaaaatcca
caataccagcccaaagtgtacaaaacattaaataatagatgtatggaactgcgaaaaact
tgcaatcatccgttgctcaattacccattcttcaatgatttttccaaggatttccttgta
agatcttgtgggaaattatggatcctggacaggatccttgttaaacttcagagaacaggg
catcgagtacttcttttcagcaccatgacaaaactccttgatattttggaagaatacttg
cagtggcgtcatcttatctacagaagaattgatggaacaaccagtttagaagaccgtgag
tcagctatagtggattttaacagacctggttcagactgctttatcttcttacttagtatt
cgtgctgccggacggggtcttaatctccagtctgctgatacggttgtcatatatgatcct
gatccaaaccctaaaaatgaagagcaggctgttgctagagcccatcgcattggacagaag
agagaagtcaaggtcatctatctggaagcagttgttgacaaaatggctagccatctgaaa
gaggatgaactacgaagtggaggtacagttgattcagaggatgaccttgccggtaaggat
cggtatatcggatcaattgagagcctcataagaagcaacattcaacaatacaagattgac
atggctgatgaggttatcaatgctgggcgttttgaccagagaacaactcatgaagagaga
cgtatgactttggaaaccttactgcatgatgaagagaggtaccaagaaactcttcatgat
gttccctcattgcaggaggttaatcgcatgattgctagaagtgaggaagaagttgaattg
tttgatcagatggacgaagaacttgactggattgaagaaatgacaaggtacaaccagctc
cccaaatggcttcgaaccagtacaaaagaagtaaatgctgtgattgctagtttatcaaaa
aaaccatcgaagaccactttgttgggtggtaatattggtttggagtccactgaaatgggc
tctgattcatctccgaaaactgaaagaaagagggggcggcccaagaaaattcatcctagc
tacaaggagttagatgatgacgattgcgaatactttgaaacaagttctgacgagagaaat
ggatattctttgcatgaagaagagggagaagttgaagaggatgatgactatagtggtgct
gttgaggcaacaccaattattaaggaacaagtggaagaggatgtccctgaatgtgatggt
ggatatgaatatccccaggattcagaaagagttagaaataaccagatactagaagaagct
ggttcctcaggatcatcctcagacagtcggagagtgatgcagacagtgtctcctgtttct
tctcagaaatttggttccctctctgccttagatggtaggccaggatctgcttcaaagagg
atgcaagatgatgtagaggaaggtgagattgttgtttctggcgattctcacatggaccaa
ttggaccaccaacaatctggaagttcgaatcatgaccgtgatgaaggtgaagacgaacag
gttttgcaacccaagatcaagaggaagcgtagtcttagggttcgccctcgtcataccatc
gagaggccagaggagaagtctggtagtgagacaccatctcttcaacggggagattcatct
ctgttgccatttcatgtggaccataaatctcaagcacagtcaagggctgattctgaaatc
aaaatatacggagagccccatgctgtaaagcatgaccaaagtgattcatcctcaaaaact
aagcgaattttgcctaggagaggctctaacatgtccaaagtgcatgttaaatctggcaga
tcaaatggcatgcctgatcctgtggaagatgctgctgaaccccacagagaaaattgggag
ggaaaagttgggaatataagtggaacttcagtttatggcacaaaaatgtctgagattgtc
cagagaaagtgcaagaatgtaattagcaagttccaaaggagaatagacaaggaaggtcct
cagatagtacctttactgacagatttgtggaagcgctttgaaaattctagttacgcaagt
ggatctggaaataatctcttggatttacgaaagattgatcagcggatagagaggttggag
tataatggagtaatggagcttgtgtctgatgtgcagtctatgttgaaaaatggaatgcaa
ttttatgggtttaactatgaggtaagaaccgaagccaggaaagtacatgatctattcttt
gatatcttgaaaatagcttttgcggagactgattttcgagaagccagaagtgcactctca
ttcactagcccagttttgaccagcaatgctccatcccctagagcggtgactgttggccca
agcaagaggcacagactgatgaatgatgtggaacctgacccagtccatcaacagaagcca
caacaacgtgcaccaattttcaatagcgaagacacaagggtgcgaagccatatgccccag
aaggaatcaagactcgggagtggaagtggtaacagtcgagactactatcagcaggatgat
tctccaccgcctgctcatccaggggatctggttatctgcaagaagaagagaaaagacagg
gagaagtccgtggtgaagactaggactggatctgctggccctgtttcacccccaagcgtg
ggtcgcggtattagaagtccaggtccaaattcagttgcaaaacaaactccccatccgcaa
gggtgggcgaaccagtctggtcagccgacgaacaagggtggagggtcggttggttgggca
aatcccgtgaagaggctaaggacagattctggaaagagacgcccaagccatttatga
DBGET
integrated database retrieval system
