Malus sylvestris (European crab apple): 126632281
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Entry
126632281 CDS
T09027
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126632281
Spliceosome [BR:
msyl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126632281
Other components
Complex C specific factors
126632281
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
126632281
NCBI-ProteinID:
XP_050158584
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Position
8:complement(30251570..30256758)
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AA seq
876 aa
AA seq
DB search
MDDYQEMERFGMEKDYEDGQWIGGEFYYRKRKDKRVQTKDDVLYGIFTADSDDDDDNDSP
RKRRKDRKVDLTKRVSFISTGIVMPNQEVDDNSRQQNDDNRPGLGATIGLGFGAATGSGL
GFKIPNLDPLGGEEDDDDEQSFLPTAFGKKIKEGAERRHKERERLKLLKQTSSQSQGRGG
SEEGQFAGLGAKGGGDGGLGAFEKHTKGIGMKMLKNMGYKGGGLGKNEQGILAPIEAKLR
PKNMGMGFNDYKETEVKRPSLQELEAEKPSKPLPDATSAKKKPSWKKRAAANKTDKDQYV
SAKELLAQKQEEGTDVLVHKVVDMRGPQVRVLTNLENLNAEEKAREEDVPMPELQHNVRL
ILDLAELDIQKIDRDLRIERDTAISLNQEKERLETEVARQKQHLDSLEDIRTVLDRLGEE
NSMGTLTLDSLTKGFGDLQKRYADDYKLCNLSCIACSFALPLFIRMFQGWNPLRNPSHGL
DLVSSWKALLHGEGEREQYLDIWDNSMSPYTQLLSEVVVPAIRIAGVNTWQPKDPEPMLR
FLESWEKLLPPSVLHSILDMVIFPKLKDAVDLWEPHRDTVPIHVWVHPWLPFLGHKLEDL
YHTIRFKLSNVLGAWHPSDGSAYTILSPWKKVFDAASWEQLMYRFIVPKLQLVLQEFQVN
PADQTLDQYNWVMSWASAIPIHLMVDMMEKFFFTKWLQVLYHWLCSNPNFEEVLNWYKGW
KELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYFRVLEQRQFEAHQKA
AAAAQANLGGTAQMDGIGHEMNLKDVIEAHAQQHGLLFRPKPGRMHNGHQMYGFGNVSIL
VDSLNQKVYAQTEETWSLVSLERLLDMHKNSLKRRR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggacgattatcaggagatggagaggtttggaatggagaaggattacgaggacggccag
tggatcggcggggagttctattaccgcaagcgcaaggacaagcgcgtccaaaccaaagac
gacgtcctctacggcatattcactgccgattccgacgacgacgatgacaacgacagcccc
agaaaacgcaggaaagaccgaaaggtcgacctcaccaagcgcgtcagtttcatctccacc
ggaatcgtcatgcccaaccaggaggtcgacgacaattcaaggcagcaaaacgatgataac
cggcctggcctcggcgccaccattggcctcggctttggtgccgctaccggttccggttta
ggttttaaaattccgaatttggatccgttggggggcgaggaggatgacgacgacgagcag
agttttttgccgacagcgtttgggaagaagataaaggagggagcggagaggagacacaag
gagagggaaaggctgaaattgctcaagcagactagtagtcagtctcagggtcgaggaggt
tctgaagaaggccaatttgcaggattaggagcaaagggcggcggggatgggggtttgggg
gccttcgagaaacacaccaagggcattggaatgaagatgcttaagaacatgggctacaaa
ggaggcggacttgggaagaacgagcaaggcattctcgctcctattgaagccaagttgagg
ccaaagaatatgggcatgggtttcaatgattacaaggagacggaagtcaagcggcctagc
ttgcaagaattggaagctgaaaagccgagcaagcctttgccggatgcgacctccgccaaa
aagaagccttcctggaagaagagggccgctgccaacaagactgacaaggaccagtatgtc
tctgccaaggagttgttagcccagaagcaggaagagggcaccgatgtccttgtgcacaag
gtggttgatatgcgaggacctcaggttcgagtcttgaccaatctggagaatttgaatgcc
gaagagaaagccagggaagaggatgttcccatgcccgagctacagcacaacgtcaggttg
attctggacttagctgagcttgatatccagaagattgacagggacctgaggattgagcgg
gacacggccatcagcttgaaccaggagaaagagaggttggagacggaggtggccaggcag
aagcaacacctggatagcttggaggatattaggaccgtcttggatcgactgggagaagag
aatagcatgggaacattgacgctggactccctgacaaagggctttggtgacctgcagaag
agatacgctgatgactataagttatgtaacctgtcttgcattgcctgctcctttgctctg
cctctgtttattaggatgtttcagggctggaatcctcttaggaacccctcgcatgggttg
gatttagtatcttcttggaaggctttgcttcatggagagggggaaagagagcagtacttg
gatatttgggataactcaatgtccccttacacccaattgctttccgaggttgtagtacct
gccattaggattgctggcgtgaatacatggcagcccaaggaccctgaacccatgcttcgc
tttctggagtcctgggagaaattgctgcctccttctgtccttcattccatattggatatg
gtaatctttcctaaattgaaggacgcagttgacttgtgggaacctcaccgggacactgtt
cccatccatgtgtgggtgcatccgtggctaccattcttgggacacaagttggaagacttg
tatcacacaatacgattcaagttgagtaatgttctgggtgcttggcacccaagtgatgga
tctgcctatactatactctcaccgtggaagaaggtgtttgatgctgcgagttgggaacag
cttatgtatagatttatagtacccaagttgcagcttgtcttacaagaattccaagtgaac
cctgcagatcagacgcttgatcaatataattgggtgatgagttgggcttctgctattcca
attcatctaatggtagatatgatggagaaatttttcttcaccaagtggctacaggttttg
tatcactggttatgttcaaacccgaactttgaagaggttttaaattggtataaaggttgg
aaggaactcattccagaggagcttcatgctaatgaaagtatccggtatcagcttaattgt
ggtcttgacatgatgaatcgggctgttgagggtatggaggtggtccaacctggtttgaag
gagaatattagctactttagggtgcttgagcaaaggcaatttgaggcacatcagaaagca
gcagcagcagcacaggcaaacttgggtggtactgctcaaatggatggcattggtcatgag
atgaatttgaaagatgttattgaggcccatgcgcagcagcatggcctgctatttaggcct
aagcctgggaggatgcataatggtcatcagatgtatggctttggtaatgtaagcatacta
gttgactctctaaatcaaaaggtatatgcccaaacagaggaaacttggtcccttgtatcc
cttgaaaggttgctggacatgcacaaaaattcacttaaaaggagacgctga
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