Malus sylvestris (European crab apple): 126632284
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Entry
126632284 CDS
T09027
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126632284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126632284
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
126632284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
ABC_trans_N
AAA_29
AAA
AAA_28
Rad17
AAA_22
AAA_30
RsgA_GTPase
nSTAND3
AAA_33
ABC_ATPase
NTPase_1
RuvB_N
T2SSE
Motif
Other DBs
NCBI-GeneID:
126632284
NCBI-ProteinID:
XP_050158593
LinkDB
All DBs
Position
8:26146726..26153710
Genome browser
AA seq
1439 aa
AA seq
DB search
MSMAAGLAGEDLSRQTSSRGSWRSTSVREMWNAPNAFQRSGRQQVTNEEEELKWAAIERL
PTYDRMRRGMLRQTMSNGKLVAEEIDMANLGEQEKKRLMDSILRAVEDDNEKFLQKLRAR
NERVGIDVPKVEVRFEKVSIEGDAYVGSRALPTLLNSSLNMIEGIIGMLKLLPSKKRNVQ
ILQDVSGIVRPSRMTLLLGPPSSGKTTLLKALAGKLDKDLRVTGKVTYCGHEFEEFVPQR
TSAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYDMLVELSRREKDSGIKPDPEIDAVMK
ATSLSGQKASLITDYVLKILGLDVCADTVVGDDMKRGISGGQRKRVTTGEMLVGPAKAFF
MDEISTGLDSSTTFQIVKFMRQMVHILDVTMVISLLQPAPETCDLFDDIILISEGQIVYQ
GPRENVLEFFEHMGFRCPERKGVADFLQEVTSKKDQEQYWFKKNEPFRYVSVADFAQGFA
TFHVGQRLVEHLRVPYDKATAHSAALVKEKYGISSMELFKACFAREWLLMQRNSFVYIFK
IVQIAIMATITFTVFFRTEMKPGQLGDSAKYMGALFFSLINVMFNGVAELSMTVFRLPVF
FKQRDALFFPGWAFALPIWLTRIPISFMESFIWICLTYYTIGFAPAASRFFKQLMAYFGI
HQMALGLFRFIAGLGRSEIRANTIGSFALLIVFVLGGFIVSKNDLEPWMLWSYYISPMMY
GQNAIAINEFLDERWSTPVPNAAENTVGKVLLKGRGLFTTETWFWICIGALFGFSILFNL
LFVAALTFLDPIVDNKTLIDNDDAENKSKRLSNQEGTDMQVRNQAKKGMVLPFEPLSLAF
NDMNYYVDMPPEMKSQGIEESRLQLLRDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRK
TGGYNEGSITISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLVYSAWLRLPKDVTKDK
RKMFVDEVVDLVELNPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL
DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRVIYAGPLGDRSH
KLVEYFEAIPGVPKIKEGYNPATWMLDVSSAAIEAQNDIDFAEIFANSDLYRRNQELIKE
LSMPQQGSKDLYFPTQFSQSFLTQCKACFWKQHWSYWRNSQYNAIRFFMTVSVGIIFGII
FWNKGKKMNTQQDIMNLLGAGYGAVLFLGAGNASAVQSVIAVERTVFYRERAAGMYSELP
YAFSQVAIETLYVLIQTFAYSLILYGMIGFNWKVDKFLCFYYFIFMCFTYFSMYGMMAVA
LTPGPQIAAIVMGFFMSFWNLFSGFLVPRTLIPIWWRWYYWGSPIAWTIYGLFASQMGDV
KTLVEIPGEKSKPVNQFLKDYLGFEEDFVIPVVFAHVGWVLLFFFLFAYGIKYLNFQRR
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggcggcagggcttgctggggaggacttgtcccggcagaccagcagtcggggg
agctggcggtctacgagtgtgagggagatgtggaacgcgccgaacgcttttcagcgaagt
gggcggcagcaggtgacgaatgaggaggaggagctcaagtgggcggccatagagaggctg
cccacatatgataggatgcggagggggatgctgaggcagaccatgagcaatgggaagctt
gtggcagaagaaatcgatatggcgaatcttggggagcaagaaaagaagcggttgatggac
agcatacttagggctgtggaggatgacaacgagaagttcttgcagaaactgagagccaga
aatgaaagggttgggattgatgttcctaaagttgaggttagatttgagaaagtatcaata
gagggagatgcatatgttggcagcagagcacttccaacactgctaaattcatccttgaac
atgatagagggaataattggaatgcttaaactcttaccgtcaaagaaaagaaacgttcag
attctccaagatgtgagcggcatcgtgaggccatcgaggatgacactgcttctgggacct
ccttcatcgggaaaaacaacacttctaaaagcgctcgcaggaaaacttgacaaggatcta
agggtaactggaaaagtgacctactgtggccatgagtttgaggaatttgtgcctcagaga
acctctgcttacattagccagcatgatcttcattatggtgagatgacagttcgtgaaaca
ttggacttttccggacgttgcctgggagttggaaccaggtatgatatgctggtagagttg
tctagacgggagaaagattccggtatcaaaccagaccctgaaatcgatgcagtcatgaaa
gccacatctttgtctggccaaaaagcgagtttgatcacagattacgttctcaagatactc
ggattagatgtctgtgctgatacggttgttggtgatgacatgaaaaggggcatctctggt
ggacaaaggaaacgtgtaactaccggagaaatgttggttggaccagcgaaagcgttcttc
atggacgaaatttcaacagggctggacagttccactacctttcagattgtcaagttcatg
aggcagatggttcacattctcgatgtgacaatggtcatctctcttttgcagcctgcacca
gaaacgtgtgatctctttgatgacattatccttatttctgagggtcagattgtgtaccaa
ggcccacgagagaatgtgcttgaattcttcgaacatatggggttcagatgcccggagaga
aaaggtgttgcagatttcttgcaagaagtgacctcaaagaaggatcaagaacaatactgg
tttaagaagaacgaaccgttcagatatgtctctgtagctgattttgcacaaggtttcgcc
acttttcatgttggccaacgtcttgttgaacacctaagagttccgtatgacaaagcaacg
gcccattctgctgccttggtgaaggaaaagtacggaataagcagtatggagcttttcaag
gcatgctttgcaagggaatggttgctgatgcagcgtaactcatttgtgtacatattcaag
attgtacagatagcaatcatggctacaattactttcaccgtattcttcagaacagaaatg
aaacctgggcagttaggggattcggcaaaatacatgggagcattatttttcagtctcatt
aacgtcatgtttaatggagtggcagagctttcaatgacagttttcaggcttccggtgttc
tttaaacaaagggatgccttattcttccctggatgggcttttgccttgcccatttggcta
accagaattcccatttcgtttatggaatccttcatatggatctgtttgacatactacacc
attggatttgcacctgcggctagtaggttcttcaaacagctcatggcttacttcggtata
catcaaatggcactcggcctcttccgtttcattgctggccttggaagatcagagattcga
gcaaacactattggttcctttgcattgctaatagtgtttgtcctaggaggctttattgtt
tctaaaaatgacctcgagccgtggatgctgtggagctactatatttcacctatgatgtat
ggacaaaatgcgattgccatcaatgaatttcttgacgaaagatggagcactcctgtcccc
aacgccgctgaaaacacagttggaaaggtccttctgaagggaagaggcctgtttaccaca
gagacttggttttggatttgtattggcgcgcttttcgggttttctattctttttaatctt
cttttcgttgcagcattgaccttcttagacccaattgtagataataaaaccttaatcgat
aatgacgacgctgaaaataagagcaagcgactatccaatcaagaaggtactgatatgcaa
gtgagaaatcaagccaaaaaaggaatggttttgcccttcgagcccctttcccttgctttc
aacgatatgaactactacgtggatatgcctcctgaaatgaagagccaagggattgaagag
tctcgactccaactcttacgagatgttagtggtgcatttaggcctggtgttctgactgca
ttagttggtgtcagtggtgctggaaagacaaccttgatggatgttttagctggaagaaag
actggtgggtacaatgaaggaagtattaccatctctggatacccaaagaaccaagccaca
tttgctcgggtcagcggttactgtgaacagaatgacattcattccccatacgttactgtt
tatgaatctctcgtatactctgcctggttacgtcttcccaaggatgtcacaaaggataaa
cgaaagatgtttgttgatgaggtcgtagatttggtcgagcttaatccattgagggatgct
ttagttggacttccaggagttaatggactttcaactgagcagagaaagaggctcactatt
gccgtagaattggttgctaatccatccatcatcttcatggatgagccaacatctggtctt
gatgctagagcagccgctattgttatgcgtactgtaagaaacactgtggatacaggacga
actgttgtctgcactattcaccaacctagcattgacattttcgaggcttttgatgagctg
ttcctaatgaaaagaggaggacgagtgatttatgctggacccctaggtgatcggtctcac
aagctcgttgaatatttcgaggctattccaggggttccgaagatcaaagagggttacaat
cctgctacctggatgttagatgttagctctgctgccattgaggctcaaaatgacatagac
tttgctgaaatatttgcaaactctgatctctataggagaaaccaggaacttatcaaggaa
ctaagcatgccacaacaaggctccaaggatctttacttccccactcaattctcccaaagc
tttttaactcaatgcaaggcgtgcttttggaaacaacactggtcctactggaggaattcg
cagtacaatgccattaggtttttcatgacagtttccgtcggaattatatttggtattatc
ttctggaacaaaggaaagaaaatgaacacacagcaagacattatgaatctgttgggggca
ggatacggtgctgttcttttccttggagcgggcaatgcttctgctgtgcaatctgttatt
gctgttgaacgaacggttttctaccgtgaaagagctgctgggatgtattctgagttgcct
tatgcattttctcaggtggctattgagacactttacgtgttaatccaaacctttgcgtat
tcccttattttgtatggcatgattgggttcaattggaaggtggacaaatttttgtgcttc
tactacttcatattcatgtgcttcacatatttctccatgtacgggatgatggcggttgcc
ctaactcctggtccccaaattgctgcaattgttatgggcttcttcatgagcttctggaac
ttgttctctggtttcctcgtcccacgaacgctaattcccatctggtggaggtggtactac
tggggttctccaatcgcctggacaatctatggcctcttcgcatctcaaatgggcgatgtt
aagactctagtcgaaattcctggtgagaagtctaagccagtgaatcagttccttaaggac
tatttgggctttgaagaggattttgtaatccccgtagtgtttgctcatgttggttgggtc
cttctcttcttctttctctttgcctacggcatcaagtaccttaacttccaaaggagataa
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