Malus sylvestris (European crab apple): 126632438
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Entry
126632438 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126632438
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126632438
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
126632438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_6
Zn_ribbon_3
Filament
RING_XB3-XBAT31
DZR_2
Prok-RING_4
zf-RING_UBOX
DUF4931_C
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
126632438
NCBI-ProteinID:
XP_050158815
LinkDB
All DBs
Position
8:25532627..25590626
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AA seq
880 aa
AA seq
DB search
MENSDSDEPEKKRPHLNSLSPTMARSSSTSPPKNRSVDAAALQLQNQQLNQQVDKQKLDL
QDLEAKMQELKDKQGSYDDFLITMNQLWNQLVDDLILLGLCAGGDQNALEILDGADYSRG
SIPSCSAEEMFLFRLLQQDSLEANGNDEIVKYVEETLALRHTSTMNLLELLEHAIHAHRE
KTMNISHTLDGKISSEDAIIQFSKIDDMMEREVKNLREGIDFLHLKHKEYANVIRTYLRS
HSRDQSEIRRITGELDDKMADLELKRRKLINLKMQKDVGPGVQNHTSSALNGTPSPEKST
ERTISLQELRNSIEETRILEADRLSEYQEANEENLALSKQLQEFQDEVKDDKYVLSSRLY
SMLNDQLQHWNAELDRYKALTDSLQADRTLVVRREKDLNVKLESADAVRNAIDNSDSRIE
ELELQLQKCIIAKNDFEINMEEAVQDSGRKDIIAEFRVMASSLCKEMGMVETQLKRWKET
AHETVSLRDKAQSLKASLSTKTNEQKILVDKCGEQVIEIKSLKALIEKLQKEKLELQIFL
DMYVQESYENRDLMEIKESERRAYFQAEMLKNALDEHSLELRVKAANEAEAACQQRLSAT
EAEITELSAKLDASERDVMELTEAIGIKDKEAEAYISEIETIGQAYEDMQMQNQHLLQQV
TERDDYNIKLVSESVKAKQAQSFVVSDKQALAKQLQQVNTSLESLKIRVSHGEEQMMALL
IDAIKTAEEDRQLAVNVETVKWELADSEKELQWLKSAFASSEKEHVHIEKDIDDIRLELD
NERSSRKNLEEQLGELNGIVAEMSSETGEAAIQKLQTEIKFCKNILQCSVCTDRPKEVVI
VKCYHLFCNYCVQKNLEIRHRKCPACGTPFGQNDIRFVKI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagactctgacgagccagagaagaagaggcctcatttgaactctctttcc
cccaccatggcccgtagctcctccacctctccgcccaagaaccgcagcgtcgatgcagca
gctctccagctccagaaccagcaacttaatcagcaggtagacaaacagaagcttgacttg
caagatcttgaagcaaaaatgcaggaattaaaggataagcaaggttcttatgatgatttc
ttaatcacaatgaatcaactatggaatcagttggttgatgatctaattcttcttggacta
tgtgctggaggagaccaaaatgctttagaaattttagatggtgctgattattctcgtggt
tcaattccatcatgttctgcggaagagatgtttctttttagactcctacaacaagattct
ctagaagctaatggcaatgatgaaattgttaaatatgttgaagaaactctcgctttgcgg
catacgtctactatgaacttgttagaactcttagaacatgccattcatgctcatagggaa
aaaacaatgaacatatctcatactttggatggaaagatatcttcagaagatgctatcatc
cagttttctaaaattgatgatatgatggaaagggaggttaaaaatctacgcgaagggatt
gattttcttcatctgaagcataaagagtatgctaatgtaattcggacttacctccgcagc
cattcaagagatcagtctgaaattaggcgcatcacaggtgagctggatgacaaaatggct
gacctagagttgaagagaaggaaactaattaatctgaaaatgcaaaaggatgttggacct
ggggtgcagaaccatacttctagtgcacttaatggaaccccgtcccctgaaaaatcaaca
gaaaggacaatcagcttgcaagaacttagaaattcaattgaggaaacaaggatactagaa
gccgaccgcctttctgagtatcaagaggcaaatgaagaaaatttagcactgtcaaaacaa
ttgcaagaatttcaggatgaagtgaaggatgacaaatatgtactttcatcaagactgtac
tctatgctaaacgatcaactccaacattggaatgcagaattggaccgatacaaagcattg
actgattctttgcaggctgacaggacccttgttgtgagaagggagaaggacctaaatgtc
aaattagagtcagcagatgcagttaggaatgccattgacaattctgattctaggattgaa
gaactagaacttcagctgcagaagtgtataattgcaaaaaatgactttgagataaacatg
gaagaagctgtccaggattcaggaagaaaggacattatagcagagtttcgtgtgatggcc
tcatctttgtgtaaagaaatgggaatggtggaaactcagttgaagcggtggaaggaaaca
gctcatgaaactgtttctttacgtgacaaagcccaatcattgaaagcttcattaagtaca
aagacaaatgagcaaaagatccttgtggacaagtgtggtgaacaggtgatagagataaag
tctcttaaggcattgattgagaagttgcagaaagaaaaactggaactgcagatcttctta
gacatgtatgtacaggaaagctatgaaaacagagacttgatggaaatcaaagaatcagaa
cgcagagcttactttcaagctgaaatgctcaagaatgcattggatgaacatagtctagag
ttgagggtgaaagcagccaatgaagcagaagctgcttgtcagcaaaggctttctgctact
gaagctgaaataactgaattaagtgccaaacttgatgcatcagagcgggatgttatggag
cttactgaggctattggaattaaagacaaggaggcagaggcttatatatctgaaattgag
accattggtcaggcatatgaagatatgcagatgcaaaatcagcatctgttgcagcaggtg
actgagagggatgactacaatatcaagctcgtttctgagagtgtgaaggcaaagcaagca
cagagctttgtagtctccgataagcaggcattggcgaagcaacttcaacaagtaaacaca
tcattagaatctctaaaaattagagtttcccatggtgaagagcagatgatggctctcctg
atagatgccataaaaactgctgaggaagataggcaactcgcagtcaacgtggaaactgtc
aagtgggaattggctgattctgagaaggagttgcagtggttgaaatctgcctttgcatct
tctgagaaggaacatgtgcatattgaaaaggatattgatgacatccgattggaattagac
aatgaaagaagctcaaggaagaaccttgaggaacaactcggcgaattgaacggcatagtt
gctgagatgagttctgaaaccggagaggctgcaatacagaaactccaaactgaaataaaa
ttctgcaaaaatattttgcagtgcagcgtttgtactgataggccgaaggaggtggtaatc
gttaagtgttatcatctattttgcaattactgcgttcaaaaaaatctagagatacgacat
cgaaagtgtcctgcctgtggaactccgtttggtcaaaatgacatccggtttgtaaagata
tga
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