Malus sylvestris (European crab apple): 126632612
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Entry
126632612 CDS
T09027
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126632612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126632612
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126632612
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Motif
Pfam:
cNMP_binding
Herpes_gE
IQ
Motif
Other DBs
NCBI-GeneID:
126632612
NCBI-ProteinID:
XP_050159002
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Position
8:29485475..29497778
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AA seq
608 aa
AA seq
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MAAPTVALDIENWTRGTESTAGSQNNSIGRQLTNYFRTDGGRSRSSTKTGKGATVKEILD
PRGRFGVIWSKMFVISCAIAVSLDPFFFYIPVVVEEKKCIRKDTSLRTVALLLRSLTDMT
FIIHILHEVRVTSTNTTAVAISILVDFLAILPIPQVAILLFFLDLNGFEYFYKRSKILNA
FLLLQYLPKVYRIHLTSKKLKPNTGKWAKGAFNFFLYILASHITGAFWYFYSIQREISCW
HRACMHHPTTPACMSTYLCDGATTTTSRNISFLGEKCPTNPTNATLFDFGMFSSALESGT
TRSMNIPPKIIYSIWWALRNLSSFGQNLQTSTYAWENGLAILICVMGLLLFLHLLGNVQT
FIQLATMKSEEKRLNSVLSMKTQRKRVDIHMWMDKNGIRDKHMKTGIMKNIEQILKGNKD
VDMEHLFSMLQWRVRKSIKHHLCMDTIKKVPLLHNLDEQVLQAVCGNLKQVMYAEDSFIV
REGEPLDKMLFITQGIAWIYSSSSSNAGGNGCLQKSDFYGEQLLSWALKSSSFSDIPIST
RTVKSHTKVEAFALMAVDVKCVVSRLWWHFSKEMSNSEDPRPEQWELLAASSIQATWRSR
QARKVGRL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccacagtggctttagatattgagaactggacacggggaactgagagcact
gcaggttctcaaaataacagcatcgggagacaattaactaattactttagaacagatgga
ggacgttcacgttcatcaaccaagacgggaaaaggggcaaccgtgaaggaaattcttgat
ccacgggggcgcttcggcgtaatatggtctaagatgtttgtgatttcatgtgcgattgca
gtctcgctcgatcctttcttcttttacattccggtcgttgttgaggagaagaaatgcata
cggaaggacacgagtttgaggactgtagctctcctcttacgttcactcacggatatgact
ttcataatacatattttacatgaagttcgtgttactagtaccaacactactgctgtggcc
atctccatcttagttgactttctcgccattcttcccatcccacaggtggcaatattgttg
ttctttctagatctgaatggctttgagtatttttacaaaaggagtaagattttgaatgcg
tttcttctccttcaatatctaccaaaggtgtatcggattcacttgacctctaagaaactt
aagccaaacactggaaaatgggctaaaggggcattcaatttctttctctacattcttgct
agtcatataacaggagccttttggtacttctattctattcaacgagagatatcatgttgg
catcgtgcttgtatgcatcatcctacaactccagcatgcatgtctacatatttatgtgat
ggtgccactactacaacttcaagaaatatctccttccttggtgaaaagtgtcctaccaat
ccaacaaatgcaaccctatttgattttggaatgtttagtagtgccctcgagtctggtacc
acgcggtcaatgaacattccaccaaagatcatttactctatttggtgggctctgcgaaat
ttaagttcttttggtcagaatcttcaaacgagtacttatgcgtgggaaaacggacttgca
attcttatttgtgtcatgggtttgctactgtttctacaccttcttgggaatgtgcagaca
ttcattcagttggcaactatgaaatcagaggaaaaaagactaaattcagtgttatctatg
aagacgcaaaggaaaagggtagatatacatatgtggatggacaaaaatggtatccgtgat
aagcatatgaagacaggaatcatgaaaaacatagaacaaatattgaaaggaaacaaagat
gttgatatggagcacttattctctatgctacaatggcgtgtcagaaaatccataaagcac
catctctgcatggatacgattaagaaagttcctttgcttcataatttggatgaacaagta
ttgcaagcagtatgtgggaaccttaagcaagtaatgtatgccgaggatagttttattgtg
cgagaaggggagccacttgataagatgttattcatcacacaaggcattgcatggatctac
tcatcgtcgtctagcaacgctggaggcaatggatgtcttcagaaaagcgacttctatggc
gaacaacttctaagttgggcactaaaatcctcctcgttttctgatattcccatctcgacc
agaactgttaagtcccacaccaaagttgaagcctttgctctcatggccgtcgacgtgaag
tgtgtagtctctagactctggtggcatttcagcaaggagatgtccaactcggaggatcct
aggccggagcaatgggagctcttagcagcttcttccatacaagcaacttggcgcagccgt
caggcaaggaaagtcggaagactataa
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