Malus sylvestris (European crab apple): 126632616
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Entry
126632616 CDS
T09027
Name
(RefSeq) autophagy protein 5-like isoform X1
KO
K08339
autophagy-related protein 5
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126632616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126632616
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126632616
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126632616
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126632616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
126632616
NCBI-ProteinID:
XP_050159018
LinkDB
All DBs
Position
8:complement(29561348..29576192)
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AA seq
368 aa
AA seq
DB search
MDMEAQRFVWDGAIPLQIHLHESDVATLPAPPPALVLNLYILAPRIGYLPLLASLLKPYF
SSALPPRLDTIWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILIPCDD
DDTVKWSFINSLKEAAYIINGNCKNVMNMSQPDQVELWRSVLNGNLEAYFRVSSKLKLGT
VGEEWAAKNLCTPKSRPNMGETDVSGQVKAGRVPVRLHVWSVSEDFDDLEDAPQIDSWDK
VSYINRPVEIPGGEGGRCFTLNDAIKSLLPEYFPDKSLINEESPTVAEEDEQKVSAEDAR
AEEEVEKSGEQTESCNQFVDAEIKLVRIQGIEPKLEIPFSWVANNLLNPEHFLHICVYLK
VPQVSTMS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaagcacagaggtttgtatgggacggagcaattcctctgcagattcatctc
catgaatccgacgtcgccactcttcctgctcccccacctgccctggtactaaacctttat
atcttagctcctcggattggatacctgccattgttggcctcacttctaaaaccttacttc
agctctgcactccctcctcgcttagacaccatttggttcgagtacaaaggcttgcctttg
aaatggtatataccaacaggagttctgtttgatcttctatgtgcggaaccagaaagacct
tggaatctcacggtgcattttagaggatatccggggaacatattgattccttgtgatgat
gacgatactgtaaagtggagctttattaattctttgaaagaggctgcatatataatcaat
ggaaactgtaagaatgtgatgaacatgtctcaaccagatcaggtggagctctggcgttca
gtcttaaatggtaatttggaagcctacttccgggtatcttctaaacttaagcttggaaca
gttggggaagaatgggcagcaaagaatttatgcactccaaaatccagaccaaatatgggt
gaaactgatgtttctggacaagtgaaggcaggtcgagttccagttcgcttacatgtttgg
agtgtcagtgaggattttgatgatttagaagatgcacctcagattgatagctgggacaaa
gtctcttacattaaccggcctgttgaaataccaggaggagaaggaggtagatgcttcact
ctaaatgatgcaatcaagagccttttgccagagtattttcctgacaaatccttgatcaat
gaagaatcaccgacggtagctgaagaggatgaacaaaaggtttccgctgaagatgcgagg
gccgaagaggaagtagaaaagtcaggtgaacaaacagagtcttgcaaccagtttgttgat
gccgaaatcaagctagtccgtatccaaggtattgagccgaaattggagataccgttctct
tgggtcgcaaacaacctgctgaaccccgagcactttcttcatatctgtgtgtatttgaaa
gtaccacaagttagtaccatgtcatag
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