Malus sylvestris (European crab apple): 126632701
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Entry
126632701 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126632701
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126632701
Enzymes [BR:
msyl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
126632701
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
126632701
Prokaryotic type
Methylthiotransferases
126632701
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
VESA1_N
Motif
Other DBs
NCBI-GeneID:
126632701
NCBI-ProteinID:
XP_050159116
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All DBs
Position
8:complement(27131276..27139702)
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AA seq
631 aa
AA seq
DB search
MEDIEDLLIGSGGGAPPGFRLPINTVGLNPKKKPNPNGRNTNAKLSQIQDPLAPLSPKVP
GTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYPLSDNPEEADLWLINTCTVKSPSQSAMDT
LIAKGKGASKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEIVEETLKGHEVRLLSR
KTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVNSVVAD
GVKEIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPGASTMLRIGMTNPPFILEHLKEIA
EVLRHPCVYSFLHVPVQSGSDTVLTAMNREYTVSEFKTVVDTLTELVPGMQIATDIICGF
PGETDEDFTQTLSLIKEYKFSQVHISQFYPRPGTPAARMKKVPSTVVKKRSRELTSAFEA
FAPYVGMEGRVERIWITDIATDGTHLVGHTKGYVQVLVAAPESMLGTSAIVKITSVGRWS
VFGEVIETIPHINDKPTSTNENRCQEKCFPGANSCETCACSTSPETRACGPESCGGQATS
EECAVTKNAVLLECWNSRNPIGWLLRKRKNHVEKQVEDEIGLRSQNKQEQGQGRLSDWGF
VDRALLGGMLVSFVTIVALLVHLGFRIMSSN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatagaggatttgttgatcgggagcggcggcggagctcctcccggttttcgt
ctgccgataaacaccgtgggattgaacccaaagaagaaacccaatcccaatggccgcaat
accaacgccaagctatctcaaatccaagacccgctcgctcctctctctcccaaagtcccc
ggcactcagactatatatatcaaaacatttggatgctcacacaaccagagtgacagtgaa
tatatggctggtcaactttcagctttcgggtatccattaagtgacaatcctgaggaggca
gacctgtggctcataaatacatgcacagtcaaatctccaagtcagtctgccatggacact
ctgatagcaaaaggtaaaggtgcaagcaagcccctggtggtggccgggtgtgtgccacaa
ggaagtcgagatctaaaggagctagaaggtgtcagtattgtaggagtccagcaaattgat
cgtgtggttgaaattgttgaagagactttgaaaggtcatgaggtgcgccttttgagccgt
aagacattgcctgcacttgacctccctaaggtgaggaaaaacaagttcgttgagattctt
cccataaatgttggttgtttaggtgcttgtacttactgcaagacaaagcatgctcgtggt
catttaggaagttatactgttgatagccttgtgggacgtgtaaactctgtggtagctgat
ggagttaaggagatatggttgagcagtgaagatactggtgcttatggtcgtgacattggg
gtcaatctaccaattttattgaatgcaattgtcgcagaactccctcctggtgcaagcaca
atgttaaggatagggatgacgaatcctccattcattctggagcacttgaaggaaatagca
gaggttttgcgtcatccatgtgtgtactcatttctacatgtaccagtccagtctggaagt
gatacagtcttgactgcaatgaatcgggaatatactgtaagtgagttcaagactgtggtt
gataccctaactgagcttgtgccagggatgcagattgcgactgatataatatgtggattt
cctggtgaaacggatgaagattttactcaaactcttagccttattaaagagtacaagttc
tctcaagttcatatttcgcagttttatcctagaccaggaacacctgctgcaaggatgaaa
aaggtccctagtactgtagtgaagaaaaggagtcgtgaattgacttctgcttttgaagct
ttcgcaccatatgttgggatggagggcagggtggaaagaatatggataactgatattgcg
actgatggaactcacttggttggccatacaaagggatacgtgcaggttcttgtagccgct
ccagaaagtatgttggggacttcagcaattgtgaagataacatcggtgggaaggtggtca
gtttttggagaagtgattgagaccatccctcacataaatgataaacccacctcaacaaat
gaaaaccgttgtcaggagaaatgcttccctggtgccaacagttgcgagacttgcgcgtgt
tcaacttcaccagaaactcgtgcctgtggaccagaaagctgtggaggacaggctacctcg
gaagaatgtgctgtaacaaagaatgccgttctgctggaatgctggaacagtagaaatccg
attggatggttactgaggaagcgaaaaaaccatgttgagaaacaggtggaggacgaaatt
ggcttgcgatcccagaacaagcaagagcaaggccaaggacgtttgagtgattggggtttc
gtcgatagggctcttctaggcgggatgctcgtgagcttcgtgacaattgtagcgctacta
gtacatcttggcttcaggattatgtcgtctaattag
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