Malus sylvestris (European crab apple): 126632753
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Entry
126632753 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126632753 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126632753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126632753
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126632753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Zn_ribbon_RanBP
MMR_HSR1
PBP1_TM
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
126632753
NCBI-ProteinID:
XP_050159177
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Position
8:complement(11781815..11807517)
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AA seq
796 aa
AA seq
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MGVRLADIHLSQILRKAGALCTGTMPRKVNYGIDYDDEYDAYEDYDYDYDDDDESGIKKN
VTGKAVESKRETERLKVWRCSICTYDNEESMSACDICGVLRNPLSKSNSDNKTVEGRCKD
SGASIMAKSIFASLPHQKPKQAVLFHQQKDDSVIEEGNNFHRLGDFKGPIHEFHKTFNVH
NKHHIDIASFQFDVPSPDDVVSNGLWSSRTGSKAGVIDLKSSKASPNVAKKSSAVSIQSS
AERSGSSSTMAQTKEQDRLDEENGLENQTVSYHHGSSGSITVQENGKFSESSSASQPTSR
RDSGVQSTTSSEIMDKPQSVTSGLKNMTLDARSGYSNNGSVRESRSQADYTPEKWMLPDQ
AIDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISRKEMHKYEKEAKLQGKGSFAYAWAL
DESAEERERGITMTVAVAYFDSRKYHVVVLDSPGHKDFVPNMISGATQADAAILLVDASV
GAFEAGMDGGKGQTREHAQLIRSFGVDQIIVAVNKMDIVEYSKDRFDLIKQTLGTFLRSC
GFRDSLVSWIPLSAMENQNLVAAPSDVRLSSWYRGPYLLDAIDSLQPPTREFSKPLLMPI
CDVIKSSSQGQVSACGKLEAGALRSGFKVLVMPSGESGTVRALERDSQACAIARAGDNVA
VTLQGIDGGRVMAGGVLCHPSFPVAVAKHLELKVLVLDVTTPILIGSQLEFHIHHAKEAA
RVVKISSLLDPKTGKVTRKAPRCLTAKQSAVVEVILHAPVCVEEFSNSRALGRAFLRALG
STIAVGVVTRIIEEQK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaaggctagccgacattcacctctcccagatcctgcgtaaagcgggagccttg
tgcactgggaccatgcctcgtaaagtaaactatggaattgattatgatgacgagtatgat
gcctatgaagattatgattatgactatgatgatgatgatgagtccggaataaaaaagaat
gtaacaggcaaagcagttgaatcaaaacgggaaactgaaaggcttaaggtctggcgttgt
tccatttgcacatatgataatgaagagagtatgtctgcatgtgacatttgtggggttctt
cgcaaccctttgtctaaaagcaatagtgataataaaacagttgaaggcagatgcaaagat
tctggagcatccataatggccaagtctatttttgcatcattgccgcaccagaagccaaag
caggctgtactatttcatcagcagaaagatgattctgtgatagaagagggcaataacttc
cataggcttggggatttcaaaggacctattcatgaattccataagacttttaatgttcat
aacaaacaccatattgatatagcttctttccagtttgatgttccatccccagatgatgtg
gtttctaatggattgtggtcctccagaacaggttcaaaagctggtgttattgacttaaaa
tcttcaaaagcttccccgaatgtggctaagaagagtagtgctgttagcatacaatcaagt
gctgaacggtcaggtagctcatctacaatggcacaaacaaaggaacaagatagattagat
gaggaaaatgggttggagaatcagacagttagttatcaccatggaagtagtggctctatt
actgtacaagaaaatggtaaattttcagagagttcatctgcttcgcagccaacaagcaga
cgtgacagtggggttcagagcactacttcttctgaaattatggacaagccacagagtgtt
accagtggcttgaaaaacatgactttggatgctcgatctggatattctaataatggtagt
gttagagaatctcgttcacaagcggactatacacccgagaagtggatgcttcctgaccaa
gctatagatacactgactcaactgaatcttgcaatagttggtcatgttgattctggaaaa
tcaacactctcaggtaggttgcttcaccttttgggaaggatatctcgaaaagaaatgcac
aaatatgagaaagaggcaaagttgcagggaaaggggtccttcgcatatgcttgggcattg
gatgagagtgcagaagaaagggaaagaggaataactatgacagtggctgttgcatatttt
gattccagaaaatatcatgttgttgtgctcgactctcctggccataaagattttgttcca
aacatgatatctggggcaacacaagctgatgctgcgatactcctcgtagatgcctcagtt
ggtgcattcgaagctggtatggatggcggcaagggacagacaagggagcatgcgcaactt
attagaagttttggtgttgatcaaattatagttgctgttaacaagatggatattgttgag
tactccaaggatcgatttgatttgatcaaacagacacttggaacatttctccgttcctgt
ggtttcagagattctttggtgtcttggataccattgagtgccatggaaaatcagaatttg
gtagcagctccttctgatgtccgtttatcgtcttggtaccgtggaccttacctgttggat
gcaattgattccctccaacctcctacaagagagttttcaaagccattgctgatgcctata
tgtgatgttatcaaatcttcctcacaagggcaggtgtctgcttgtggtaaattggaagcg
ggagctcttcgaagtggatttaaggttctggtgatgccttcaggagaatcagggactgta
cgagcgttagaacgtgactctcaggcttgtgcaattgcaagagctggagacaatgtggct
gttactctgcaaggcattgatggaggtcgtgtgatggcaggaggtgtgctctgtcaccct
agttttccagttgcagttgcaaaacatttggaactaaaggtgcttgttttggatgttaca
accccgattttaattggctctcagttggaattccacatacaccacgcaaaggaggctgct
agagttgtaaaaatatcatcattgcttgatccaaagactggcaaagtgacaaggaaagct
cctcgctgtcttactgcaaagcagagcgcggtcgtagaggtaattcttcacgcgccagtt
tgtgtggaagagttttctaattctagagcgctggggagggcatttttaagggcattagga
agcactattgccgtcggcgttgtaacccggattatagaggagcagaagtaa
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