Malus sylvestris (European crab apple): 126632759
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Entry
126632759 CDS
T09027
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
msyl01001
]
126632759
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126632759
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
126632759
Protein kinases [BR:
msyl01001
]
Serine/threonine kinases: Other
Other
126632759
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126632759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
LisH
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_VPS8
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
126632759
NCBI-ProteinID:
XP_050159186
LinkDB
All DBs
Position
8:complement(11848571..11857332)
Genome browser
AA seq
1935 aa
AA seq
DB search
MEAAMDEQQNLGQGQGEEGEPGTPVPPPPPPPAAAPESQSQGGEEEEDEEEEEEVKNEGD
ELVAKAQKLMDKITAAPDNPSPTVLHALASLLETQESRYMEENGHSSSNGRASHYIGRLG
TSVREHEDFFELISSKYLSDTRYSVAVQAAAARLLLTCSLTWNYPHVFEDAVLERIKDWV
MDETSISSVEYQNWKHDLGGKEVSDFEMLKTYSTGLLAVCLAGGSSVVEDVLTSGLSAKL
MRYLRVRVLGETSNTQKDVTHLTESKNTSGAICIRGRDEGRARVRQSLETNHFDDPKITD
ERCLDDRIVEGDHVRSISRQTFVEEQWVDGGRTPDGLAEEVEINDADGKMKSGDFDEIGR
DDSSRRRPNRGLARSRGKGRTNEGVVENEQLLTSPGSGSRLGHGRSVKDRSSLKNSDVKK
IPDSRKSEDVFFLERADNDDCFQDCRVGCKDISEPVKKAVRAAEAEARAANAPAEAIKAA
GDAAAEVVKSAALEEFGTTNNEEAAVLAASRAASTVIDAANSVEVSRSSSGINAESMTSS
STEPENHVDAEEYFILDAESLAQLREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQ
RNSRHREASKVAMLLPDVMKLICALAAHRKFAALFVDRGGIQKLLAVPRVAQTFFGLSSC
LFTIGSLQGIMERVCALPSDVVYQVVELALQLLECSQDQARKNAALFFAAAFVFRAVLDA
FDAHDGLQKLLGLLNDAASVRSGVNSGALGLPSSGSLRNDRSPAEVLTSSEKQIAYHTCV
ALRQYFRAHLIMLVDSIRPNKNTRSAARNLPSVRAGYKPLDISNEAMDAVFLQLQKDRKL
GPAFVRTPWPAVDKFLGSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKM
IVNSTVSNNRVAIAVILDAASVGGSYVDAEIIQSALNVLVNLVCPPPSISCKSPILAQGQ
QSAQPSTGPSGESAVADRGSTAAPGTQFNSSSAHAPATPTSGLVGDRRISLGVGAGCAGM
AAQLEQGYRQARESVRANNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIA
HILTKLQVGKKLSELIRDSGNQTNGTEQGRWQAELSQAAIELIAIVTNSGRASTLAATDA
AMPTLRRLERAAIAAATPITYHSKELLLLIHEHLQASGLAATAASLLKEAQLMPLPSLAA
PSSLVQQATQEAPSGQIQWPSGRTSSGFLTNKSKITAKDEELKFDPTFSYMKKKPLVFSP
NFGLQSKNQSHDSHLTSPRKVFSAAKQFSATANASETPSVSLPKPTTDTESHSKTPIGLP
MKRKLSELKDPGCLLLSGKRLHTGDHGLRSPVCPTPTTVRKSGLLTDPVGFSTPTANLRD
QYGRSTPAYLPSEYQDDNQYGSSSVGLATPASQFGLQSDPQPSNSERLTLDSVVIQYLKH
QHRQCPAPITTLPPLSLLHPHVCPEPKRNLDAPSNVTARFGTREFRNIYGGVHGNRKDRQ
FVYSRFRPWRTCRDDSGTPLTCISFLSDSSHIAVGSHGGELKIFDSNSSNVLESCASHQS
PVTLVQSRLSGETKLVLSSSAQDVRLWEASSVSAGPMHSFEGCKAARFSNFGDIFAALST
ELTQREILLYDIQTSQLESKLSDTSSSSTGRGHVYSQIHFNPSDTMLLWNGVLWDRRVST
PIHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTTITFNARGDVIYA
ILRRNLDDVMSAVHTRRVKHPLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGL
ITMDDQDDMLASARVYEIGRRRPTDDDSDPDDAESEEEDEDSEDDDDGDVDPILGPDLDG
DDSDMDDMSNGDDDDSVSDDDDDDDGDFIVDDLEAGGGMLEIVTDGEEEDDDDDSDGMES
YSSGDEDYMSNGFGV
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccatggacgagcagcagaacttagggcaaggccaaggggaggaaggcgaa
cccgggacgccagttccgcctccaccgcctccgccggcagcggcgccagaatcgcaatct
cagggaggcgaggaggaagaagatgaggaagaggaggaggaggttaagaatgaaggcgac
gaattggttgccaaggctcagaagcttatggacaagatcactgccgcgcctgataaccct
agtcctactgttcttcacgcccttgcctcgctccttgaaactcaagagtctcgatacatg
gaagagaatggtcattcatctagcaatggtcgggcttcacattacattggacggctcggg
acctcagtccgggaacatgaagatttctttgaattaatatcttcaaaatacctgtcagat
acaagatactctgttgctgtgcaagcagctgctgcaaggctgcttttaacctgttcacta
acctggaattaccctcatgtttttgaagatgctgttttggagagaataaaagattgggtg
atggatgagacttcgatctcatcggttgaatatcagaattggaagcatgatttggggggg
aaggaggtctcagattttgaaatgctaaagacctattctacaggacttcttgctgtatgt
ttggctggtggcagttcagtagtagaagatgtgttgacatctgggctgtcagccaaactt
atgcgttatcttcgtgtgcgtgttttgggggagacaagtaatactcagaaggatgttact
catttaacagagagtaaaaatacctcaggtgctatttgcataagaggtagagatgaaggt
cgtgctagggttcggcagagtttggaaacaaatcattttgatgatccaaagataacagat
gagagatgtttagatgatcggattgttgaaggggatcatgtcagaagtatcagtaggcaa
acgtttgttgaagaacaatgggttgatggtggaagaacacctgatggattggctgaagag
gttgagatcaatgatgctgatggaaagatgaaatctggagattttgatgaaattgggaga
gatgactcctcaaggcgcagacccaaccgcggattggcaagatctagagggaagggaagg
accaatgaaggagttgtagagaatgaacagctcttgacctctccaggatctggtagtcga
ttgggacatggacggagcgttaaagataggagttcgctaaaaaattcagatgtgaaaaaa
ataccggattctaggaagagtgaggatgttttctttttggaaagggcagataacgatgac
tgcttccaggactgtagagttggatgtaaagatatttctgagccagtaaagaaagcagtt
agagctgcagaagctgaagctagagcagccaatgcacctgcagaagcaatcaaagctgct
ggtgatgctgctgctgaagttgtcaaaagtgcagctttagaggaatttggaactacaaat
aatgaagaagctgcagttttggccgcttcaagagcagcgtctactgtcattgatgctgcc
aattcggttgaagtttcaaggagctctagtggcatcaatgccgaatcaatgacttcaagc
agtacagaaccggaaaaccatgtagatgctgaagaatacttcatcctggatgctgagtcc
cttgcacagttgagagaaaaatattgtattcaatgtcttgagactttaggagaatatgtc
gaagttcttggacctgtactgcatgagaagggggtagatgtatgtcttgcattattgcaa
cgaaattccagacatagagaggcttcaaaggttgctatgcttttgcctgatgtaatgaag
ctcatctgtgctttggctgctcaccggaaatttgctgccctgtttgtggataggggtggc
atacagaaacttcttgctgttcctagggttgctcaaaccttctttggtctttcttcttgc
ttatttactatcggctcgctccagggaataatggagcgtgtttgtgctcttccttcagat
gtggtctaccaggtggttgaattagctcttcaacttcttgagtgctcacaggatcaagcc
aggaaaaatgcagccttattctttgctgctgcatttgttttcagggcagtacttgatgct
tttgatgctcatgatggcttacagaaattactgggtcttttaaatgatgctgcatccgta
agatctggagtaaattctggggcactaggactcccaagttctggatcacttcggaatgac
aggtcacctgcagaagtactgacttcatcagagaaacagatagcttaccacacttgtgtt
gctttgcggcagtacttcagagcacatcttattatgcttgtggattctattcgtccaaat
aagaacactcgaagtgcagctcggaatcttccaagtgtaagggcaggttacaagccactt
gacatcagtaatgaagctatggatgcagtatttctgcagctacagaaggaccgaaagctg
ggtcctgcatttgtgagaactccttggcctgcagtcgataagtttttgggttctaatgga
catattactatgttggagttatgccaggctccacctgttgagcgttatttacatgattta
cttcaatatgcattaggtgttttgcatatcgtgacattggtccctagcagccgcaagatg
attgtgaattcaacagtaagcaataatcgtgttgctatagctgtcattttagatgcagcc
agtgttggtggtagctacgtggatgccgagatcattcaatcggcacttaatgtgttggtc
aatcttgtttgtcctccaccatcaatcagttgtaaatcacctatacttgcacaaggccag
cagtctgcccaaccctctactggtccttctggggaatcagctgtagcagatcgaggctcc
actgcagcccctggtacacagttcaacagtagcagcgcacatgctcctgccacaccaact
tcaggattggtgggggatcgccgaatatctttaggagttggggcaggctgtgcaggtatg
gctgcacaattagagcaaggctatcgccaagctagggagtctgttcgtgccaacaatggt
ataaaggttcttctgcatctcctccaaccccgtatatattctcctcccgcagcactcgac
tgtctccgtgcacttgcttgccgagtccttcttggtttagccagagacgatactattgcc
catatattgacaaaactccaggttgggaagaaactatcagaactgattcgagattcaggt
aaccagacaaacggaactgaacaaggcaggtggcaagctgaactttcacaggcagcaatt
gagcttattgcaattgtgacgaattcgggacgagctagcacattggctgccactgatgct
gctatgccaacattgaggcgcttagaaagggcagctatagcggctgccactcctatcaca
taccattccaaggaactactgttattaatacatgaacaccttcaggcatctgggttggcc
gcaacagctgcctctttgctaaaagaggctcagttgatgcctttgccatctttggctgcc
ccctcatctcttgttcagcaagccacacaagaagccccttcaggacaaattcagtggccc
tctggtcgaacctcaagtgggtttctcacaaacaaatcaaagattactgcaaaggatgag
gaattaaaatttgatcctactttctcatatatgaagaaaaaacctctagttttctctcct
aattttggtctacagtcgaagaatcaatctcatgactctcacctcacatcgcccaggaaa
gtttttagtgcagcaaaacagttttctgctactgcaaatgcatcagaaactccttcagta
tccctgccaaaacctaccactgataccgagtcccatagtaagacacccattggcttgcca
atgaaacgaaaattatctgagctgaaggatcctgggtgtttgttattgtctgggaaacgc
cttcacactggcgaccatggacttcggtctccagtttgtcctacacctaccacggtgcgg
aagagtggcctactaactgatcctgttggattctctaccccaactgccaacttgagagat
cagtatggtcgatcaacaccagcttatttgccatcagagtatcaggatgataaccagtat
ggtagttctagtgtcggccttgcaacacctgcctcccaatttgggcttcagagtgaccct
caaccaagcaactcagagcgattaactctagactctgtggttattcagtatttgaagcac
cagcatcgccagtgtcctgcacctataaccactcttccaccactttctcttttacacccc
catgtttgtcctgaaccaaaacgaaacctcgatgccccatcgaatgtaacagcccggttt
ggaacgcgtgagttcagaaacatatatggtggggttcacggtaatcgtaaggaccgtcaa
tttgtttacagtagattccgaccatggagaacttgtcgtgatgattctggtacccctttg
acatgcatttcctttcttagtgattcctctcacattgcagtaggcagccatggtggagag
ctcaaaatttttgactccaatagcagcaatgtactggagagttgtgcaagccaccagtct
cctgtaacgcttgttcagtcgcgtctttctggtgagaccaaacttgtgctttcatcaagc
gcccaggatgtgaggttgtgggaggcatcttcagtctctgctgggcctatgcattccttt
gaagggtgcaaggctgcaagatttagcaattttggggatatttttgctgctctatcaaca
gagctgactcagagagagattctcctgtatgacattcaaactagccagttggaatcgaaa
ctgtctgacacatcttctagctctacaggtcgtggacatgtttactctcaaatacatttc
aacccttcagacacaatgctgctttggaatggggtgctgtgggacaggcgggtttctacc
cctattcatcgttttgatcagtttacggattatgggggtggtggcttccatcctgctggg
aatgaggtgattataaactccgaagtctgggatctccggaaatttagactccttagaagt
gtaccttcgttagaccaaacaacaataactttcaatgctcgtggtgatgtaatttatgca
atcctcagaagaaatcttgacgatgtaatgtcagcagttcacacccgacgcgtaaagcat
ccactctttgccgctttccgcacagtggacgcagttaactactctgacattgccactatt
ccggttgatcgttgtgtcctcgactttgcaacagaacctactgattcgtttgttgggttg
atcacaatggacgaccaagatgacatgttagcctctgctagagtttatgaaattggtcga
cgaaggccgaccgacgatgattccgatcccgatgatgctgagagtgaagaagaagatgag
gattccgaagacgatgacgatggggacgtggaccccatactgggcccggatctggatggg
gatgatagtgatatggatgatatgagcaatggcgatgatgatgatagcgtgagtgacgat
gatgacgacgacgacggagatttcatcgtggatgaccttgaggcaggaggtggaatgctg
gagattgtgacggacggagaggaggaggacgacgacgacgacagtgatgggatggaatcc
tatagcagtggggatgaagattatatgagcaatggttttggtgtttaa
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integrated database retrieval system
