Malus sylvestris (European crab apple): 126632787
Help
Entry
126632787 CDS
T09027
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126632787
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126632787
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126632787
03036 Chromosome and associated proteins [BR:
msyl03036
]
126632787
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126632787
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126632787
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126632787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
126632787
NCBI-ProteinID:
XP_050159233
LinkDB
All DBs
Position
8:3176627..3190941
Genome browser
AA seq
511 aa
AA seq
DB search
MNGGGEGLAAPATSGAAVSPLEWKFSQVFGERTAGEEVQEVDIISAIEFDRTGDHLATGD
RGGRVVLFERTDIKDHGGHRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIRWCQTANGALFVLSTNDKTIKYWKVQEKKIKKVCEMNVDASKSMENGAVASSMSAS
SKPYLANGCKDRPVSSPSNDTSFPALHLPVVVTSQETSLVARCRRVYAHAHDYHINSISN
NSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYS
SSKGSIRLIDLRQSALCDTHSKLFEEQEAPGSRSFFTEIIASISDIKFAKNGRHILSRDY
MTLKLWDINMDSGPVATLQVHEHLRPKLCDLYENDSIFDKFECCLSGDGHRVATGSYSNL
FRVFGCSEGSTEATTLEASKNPMRRQVQTPARPSRSLGNLPRVLRRGADNSGADTNGNSF
DFTTKLLHLAWHPSENSIACAASNSLYMYYA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcggagagggcctcgcggctccggcgacgtcaggggcggccgtatcgccg
ctcgagtggaagttttcgcaggtattcggagaaaggaccgccggcgaagaagttcaggaa
gttgatataatatccgctattgaatttgatagaacgggggaccaccttgccactggagat
cgtggaggccgggtggttttatttgaaagaactgatataaaggatcatggtggacaccgg
agagatctggagagaatggattattcaatcagtaggcatcctgagttccgctataaaacc
gaattccagagtcatgaacccgagtttgattatcttaagagcttggaaattgaggaaaaa
atcaacaagatcagatggtgtcaaacagctaatggtgcactgtttgtcctctccactaat
gacaaaaccatcaaatactggaaggtccaggagaagaagataaagaaagtatgtgagatg
aatgtggatgcttctaaatctatggaaaatggtgcagttgctagttctatgtcagcaagc
tcaaaaccatatcttgcaaatggatgtaaagacagacccgtcagttctccaagcaatgac
acttcatttccagctctgcatttgccagtggtagtgaccagtcaagagacgagccttgtg
gctagatgtcgaagagtctatgcccatgctcatgactatcatattaattcgatttcaaat
aacagcgatggtgaaacttttatatcagctgatgaccttcgaattaatctttggaaccta
gagattagcaatcaaagttttaatattgttgacgtgaagccggcaaacatggaggatctg
actgaggtgataacatccgcagaatttcaccctactcattgtaacactttggcatacagt
agctcaaaaggctcaattcgtcttatagatctgcggcagtcagctttatgtgacactcat
agcaaattgtttgaagaacaagaagcgcccggctcaagatcttttttcactgaaataata
gcatcaatttcagatattaagtttgctaagaacggaagacatatactaagtcgggattac
atgactcttaagttatgggacatcaacatggattctggcccagttgccactctccaggtt
catgaacatctaagaccaaagctctgtgatttatacgaaaatgattctatcttcgataag
tttgagtgctgtctaagtggagatggacaccgagtggcaacaggttcttacagcaatctg
tttcgagtgtttggttgttctgaagggagcacagaagcaacaacattggaggccagcaaa
aaccccatgaggagacaagttcaaacgccagcaaggccttctagatctttgggcaacctt
cctcgtgttctcaggcgaggtgcagataactctggagctgacacaaacggaaattctttt
gacttcacaacaaagttgctacatcttgcatggcacccttctgagaattcaatcgcctgt
gctgcttcaaacagcctttacatgtattatgcgtaa
DBGET
integrated database retrieval system
