Malus sylvestris (European crab apple): 126632864
Help
Entry
126632864 CDS
T09027
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126632864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126632864
03041 Spliceosome [BR:
msyl03041
]
126632864
03032 DNA replication proteins [BR:
msyl03032
]
126632864
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
126632864
Spliceosome [BR:
msyl03041
]
Complex A
U1 snRNP components
Sm proteins
126632864
U2 snRNP components
126632864
Complex B
U1 snRNP components
126632864
U4/U6.U5 tri-snRNP components
126632864
Complex C
U2 snRNP components
126632864
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
126632864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6454
Motif
Other DBs
NCBI-GeneID:
126632864
NCBI-ProteinID:
XP_050159348
LinkDB
All DBs
Position
8:complement(29898544..29901244)
Genome browser
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSTDAYMNLQLANTEEYIDGQSTGNL
GEILIRCNNVLYLRGVPEDEEIEDAEQD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaataccagttaaccccaaacctttcttgaacaatctgactggaaagactgtc
attgtgaaacttaaatggggaatggagtacaaaggcttccttgtctcaacggatgcctat
atgaacttgcagctggccaacaccgaagaatatattgatggacaatccactggaaatctg
ggagaaattttgatcaggtgtaacaacgttctctatcttcgtggggtgccagaggatgaa
gagattgaagacgctgaacaggactga
DBGET
integrated database retrieval system
